Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco8g00289 | ATGGAAGAAGACCAAGAGGCTCAGCATCAAAGGGAAAATCGAGGGTCGGTTCCCGGGGAAGGAGAAGGGTTAGAGGGTAATGGAGGAGGTGTTAACGACAATGGGATTCGTTCTTTCACGTGTCATATCTGCAACAAAGGTTTCAGTTCAGGTAAAGCTCTTGGTGGGCACATGAGAATCCACAACCTTTCTAGAAAACAGGTTCATAAGGAGAAACAAGGTACTAGTGATGTAAAATCCAAGACACCGAAATGGGTGTTGGTGGATGGCAACCCTATTTGTTCCGTTTGTGGAAAGAGTTTTTCTTCATTGAAGTCCTTGTTTGGGCACATGAGGTCTCACACTGAGAAGGCGAAGAGGGGAATTCAAAGCAACACTCCGATCGTTGGTGCGTCCTCCAATTCCACTTCTTCCTCGACCCTTTCTGATGATTTTGCTGTTGATCTCTCTGGAGTTCTCAGGGGTTGGTCTGTGACTGCCAAGAGGGGCCGCAGAAGCCCTTCTTGCAGCAAATCAAATTCTGGTTTGGAAGATGGTGATGAGATTGAGCCACGTATGCAAGAGGCTGCGTATGAGCTCATGTTGCTGGCCAGAGGGAGTCCCAGGTGGGAGGAAGAGGTTGGTGCTGATCCGATTCAAGAACATCCTTTCAGAAAGAGGGGGTATGAAGAGGAGTTGTTGCACCCAGTTATTGGGAATTCTGATGACGTGAAGATCAAGAAGAGAAATCGAAAGAAAGTGAAATTAACAGAATTAGCTTCAACCGAGGAGGGGAACAGGTTCTCCAGATGCAGAAAATGCAATACAACTTTCCAAAGTCACCAATCTTTGAAGGGTCATCTATGCAGCCTTCAAAATTCTAAGAACATTCAGCCTCAGTCAGATGGTGTGTCAGCCACAAAAGAGGAGCATCATGCCAAGGCAAACACACAAGGGGAGAAAACAGGAACAGGAACTGTTCTAGAGGGTAGTGGTGTGAAAGCCACGAGAGGAGTTTTCAACAAGACTTTCTCAACTGTTGAAGCCACTGGGGACCACAAGAGATCTGATTGGACCAGCATGGCAGAAGCTCAGTCAGCTCAGGCAACTTCTTTAAACGTGGAAACTGGTCAGAATTGTTCCAAGGTTTTTAGTTTTGATCTTAATGAGATTCCTGCTATGGATGGGGAAGAGGGTGTTCAATCAGACTTGTTTATTCGTGCCAATATTATGACATCATCCAGTTATGATTCCTCTTCCTAA | 1242 | 0.4581 | MEEDQEAQHQRENRGSVPGEGEGLEGNGGGVNDNGIRSFTCHICNKGFSSGKALGGHMRIHNLSRKQVHKEKQGTSDVKSKTPKWVLVDGNPICSVCGKSFSSLKSLFGHMRSHTEKAKRGIQSNTPIVGASSNSTSSSTLSDDFAVDLSGVLRGWSVTAKRGRRSPSCSKSNSGLEDGDEIEPRMQEAAYELMLLARGSPRWEEEVGADPIQEHPFRKRGYEEELLHPVIGNSDDVKIKKRNRKKVKLTELASTEEGNRFSRCRKCNTTFQSHQSLKGHLCSLQNSKNIQPQSDGVSATKEEHHAKANTQGEKTGTGTVLEGSGVKATRGVFNKTFSTVEATGDHKRSDWTSMAEAQSAQATSLNVETGQNCSKVFSFDLNEIPAMDGEEGVQSDLFIRANIMTSSSYDSSS | 413 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 116 | 141 | - | - | |
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
| Phco8g00289 | 413 | SUPERFAMILY | beta-beta-alpha zinc fingers | 93 | 281 | IPR036236 | - | |
| Phco8g00289 | 413 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
| Phco8g00289 | 413 | FunFam | Zinc finger protein | 92 | 115 | - | - | |
| Phco8g00289 | 413 | Gene3D | Classic Zinc Finger | 29 | 88 | - | - | |
| Phco8g00289 | 413 | Gene3D | Classic Zinc Finger | 93 | 144 | - | - | |
| Phco8g00289 | 413 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 41 | 61 | IPR013087 | - | |
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 290 | 322 | - | - | |
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 120 | 141 | - | - | |
| Phco8g00289 | 413 | SUPERFAMILY | beta-beta-alpha zinc fingers | 37 | 65 | IPR036236 | - | |
| Phco8g00289 | 413 | Pfam | C2H2-type zinc finger | 39 | 61 | - | - | |
| Phco8g00289 | 413 | Pfam | C2H2-type zinc finger | 93 | 115 | - | - | |
| Phco8g00289 | 413 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 39 | 66 | IPR013087 | - | |
| Phco8g00289 | 413 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Phco8g00289 | 413 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - | |
| Phco8g00289 | 413 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 191 | 388 | IPR044653 | GO:0003700 | |
| Phco8g00289 | 413 | SMART | c2h2final6 | 92 | 114 | IPR013087 | - | |
| Phco8g00289 | 413 | SMART | c2h2final6 | 39 | 61 | IPR013087 | - | |
| Phco8g00289 | 413 | SMART | c2h2final6 | 262 | 282 | IPR013087 | - |
Transcription factors information