Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00266 ATGGATGGGGTCGCACGTGCGGACAAGGCTCCGTCCACGGACTTGGCCTCGGAGTGGCGTCCCCGCGGCTCTGCGTTCGCTCCTTGTGTGCCTAAGCCTGAAGAAGAAGCTTCTGCTGCTGCTGTTGAGAAGCCGCAACCGTTTCGCGTGGTTGTGAGAAAGCCCTTGGTGGCTAGATTGACCAAGGAAATAGTTCAAACATACCAAATATGCAATCCACAGTTTAAATATTCCGAAGATCTAAATCCAAAAAGATTTTTGACCACCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATCTTGACAGTGAATTTAGTCTTGAACCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAAGTCTGGGATTCAGATACCAACAGTTTTGTTGCCGTGAAAATCATTAAAAACCAACCTGCATACTATCAACAAGCATTGGTTGAAGTAACTATCTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTTTATCAACGGCATTTGTGCATTTGCTTTGAATTGTTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCCCTTGGAATTGTTCAGCTATTCTCTAAGCAGATTTTATGCGGACTTGCTCTGCTAAAAGAGGCTGGAATTATTCATTGTGATTTGAAGCCAGAAAACATACTTCTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTGAAACGGATGATTGAAATACTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACTCAAGTAAATTCTTTAAGTGCATTGGGAGTCTCCAGAACATAGAGAGCAGTGAGAGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACAGTGGAAGAATACGAAACTAGAGAATTGAAGAAGCCATCAATAGGAAAAGAGTATTTTAATCATATGAATCTAGAGGCAATTGTTACCAACTATCCTTACAGAAAAAACCTACCTAAAGAAGATATTGTCAAAGAAAGTCAAATACGACTGGCTCTTATTGATTTTTTGAAAGGGCTTGTTGAATTGGATCCTTTAAAGCGCTGGTCACCTGTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACATCCTTATAAGCCTCCCCCTGAGACTCCTCAAATGCCCGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCTGCCGGTCTATCACCTAATGTTCAGGGAAAAAGCCGAGCTTCACTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCAGCCTGCGAATAGTTATGGGAGTGTAGGAAGCCATGGGAGCTATAATGACAGTATTGGGCTTGGAAGCAGCTATGGAAGTTTTGGAGAAAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCCGGTATGAACATGCACAATCAGGGCAGTATGTCAATGCTTGGGAATAGTCCCGATGCTAGGAGAAGAGTTAAATACCAACCTGGGAATGGGTTGGGCATAAGTCCATCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTTGTTTCTCCAGGACATTTTGGACCAACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAATTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACAACATTTTCTTCAAATTGGCAAAGTCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAACCTCTTGGCAGTTCGCCATCATATCTACAGTCAAATTGTATTCCTGGAAACCGGAAACAACGAGGAAGTGGAGGATTTTCTGCTAATCCGAACATTTCATGTTTTAAGCCTGGTGCTAATTTGAACTCACAATCAACAGAATTGGGTCATGACAATGCAGAGACAGGCATTTCATTGCCTGATCCTGGCGATTGGGACCCTAATTACAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCTGTTTGGCAAATGAGTTTGGCAGAAGTATGAATCTTGGATCTACTGAAACATGGGCTGGATTTGGAAGGTTCAACCATGAGTCCAGCTCAAATACTCCAATAATCATGCAAAGACAAAATGGACCAAGTCAATCATTTACTAATGTCGAGATGGGTAGCCTTCCAACGCATGATCTTCAAGCCGCATATGTACCCTCTCTGTCTAAGCAGTTTCATCTCATGCCTCATATTTTGCATAATTCTCCAAGCCGTTTTGGACACCAATCTGTTCAAAGATATACACATGGTAGACCCCCCCAGGCTGCTGATTGGAATCAAATTAAAATTCAGGCTCCTTCTGGTTTCAGCAGTGTGGGTCCTCGTTCTCCTAGGGGTAACTCATTCACCAACAGTATGACATGGGGGCGCAGAATGGATCCTCCGGTATCAAGCATGCCTCCGACATCCCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2844 0.4195 MDGVARADKAPSTDLASEWRPRGSAFAPCVPKPEEEASAAAVEKPQPFRVVVRKPLVARLTKEIVQTYQICNPQFKYSEDLNPKRFLTTPSVGVLNDGYDNVNSDLILTVNLVLNHLEKNKRYIVKDLLGHGTFGQVAKVWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNSSKFFKCIGSLQNIESSESSKNGRSVYQALTVEEYETRELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLKGLVELDPLKRWSPVQASKHPFVTGEPFTHPYKPPPETPQMPVVQNIKVDNHPGGGHWFAAGLSPNVQGKSRASLYSSPHFQMVQHQPANSYGSVGSHGSYNDSIGLGSSYGSFGESSNMFAYYSPIGPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVVSPGHFGPTSPARGTSHGSPLGKTAAISQFNRRKNWGHSGSPQTQETTFSSNWQSQYPDSTSHTEGTSQPLGSSPSYLQSNCIPGNRKQRGSGGFSANPNISCFKPGANLNSQSTELGHDNAETGISLPDPGDWDPNYSDELLLQEDGSDESCLANEFGRSMNLGSTETWAGFGRFNHESSSNTPIIMQRQNGPSQSFTNVEMGSLPTHDLQAAYVPSLSKQFHLMPHILHNSPSRFGHQSVQRYTHGRPPQAADWNQIKIQAPSGFSSVGPRSPRGNSFTNSMTWGRRMDPPVSSMPPTSRTRKDYARID 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00266 947 CDD PKc_YAK1 123 466 - -
Phco8g00266 947 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Phco8g00266 947 MobiDBLite consensus disorder prediction 648 757 - -
Phco8g00266 947 SMART serkin_6 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00266 947 Coils Coil 943 947 - -
Phco8g00266 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Phco8g00266 947 MobiDBLite consensus disorder prediction 618 768 - -
Phco8g00266 947 SUPERFAMILY Protein kinase-like (PK-like) 118 489 IPR011009 -
Phco8g00266 947 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 86 202 - -
Phco8g00266 947 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
Phco8g00266 947 MobiDBLite consensus disorder prediction 901 947 - -
Phco8g00266 947 MobiDBLite consensus disorder prediction 1 26 - -
Phco8g00266 947 MobiDBLite consensus disorder prediction 901 925 - -
Phco8g00266 947 Gene3D Transferase(Phosphotransferase) domain 1 204 467 - -
Phco8g00266 947 PANTHER DUAL SPECIFICITY PROTEIN KINASE 52 469 - -
Phco8g00266 947 MobiDBLite consensus disorder prediction 623 640 - -
Phco8g00266 947 ProSiteProfiles Protein kinase domain profile. 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00266 947 Pfam Protein kinase domain 124 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00266 947 MobiDBLite consensus disorder prediction 581 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00266 Phco-Chr8 2429818 2451845 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Phco8g00266 Pkinase 1e-49 CL0016