Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00218 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGCGATGGAACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATAAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACTTGAGAGAAGTCAAGTCATTGCGAAAAATGAATCATCCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAATGTGACACTCTGTGCCTTGTTTTTGAGTACATGGAATTCAACCTGTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGATGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTGTATGCACCAGCGTGGATACTTTCATCGTGATCTGAAACCAGAGAACTTGCTGGTCACTAAGGATGTCATAAAGATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCCTATACAGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTACTTCAGTCCCATTTATATGGATCTAAAGTTGATATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTACGTCCTCTATTCCCCGGTACCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTAATAGGTAGTCCAACAACTGAATCTTGGGCTGATGGACTCAAGCTTGCCAGGGATATCAACTATCAGTTTCCACAGCATGCTAGCGTACATCTCTCTTCTCTTATCCCATCCAGAAGTGATTGTGCAATTAGCCTTGTTACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCATCAGAGGCTCTTCAACATCCTTTCTTTCAGAGTTGCTTTTATGTCCCTCCGTCCCTTCGCACAAGAGCCGTGACCAGAACTCCTCCATCTGCTGGGACCAGGGGTTCATTGGACCGGCAGGGGCTCAAGAGATACTCTAGTGCTTTGCCTAATACAAAAATCACAAACAATTTCTCTTCCCAAAAATTACATGCTTCTTCTATAGTTTCAGGTGTGCAGCGGAAGCTGGATTTGGCAACCAAGGATGGAATTAAGAACAAGAAGCCATTGAAGACTACTACTCAACAATCAAAATATCGATTTACAGGAAAAGACAGCCCGACTTCTTTGAACAAGGGGAGGAGTGTACGCGGGGTTTCGGAAAGCGCTGAGAAGTTGGCCAATATGTCCATCGGTACGCGAAGACAGTCCATGGGACAAAGCCGTCCATCTCCTCCAATGAAGACAGTCAATTGGATTTCTGAATCTGGAAACTTGGCACTCAGGTCCGGACACCAAAATCCAACTGAGAGAAGTTTGACAAGAAAAGTTGCAGGCTGA 1362 0.4339 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRECDTLCLVFEYMEFNLYQLMKNREKLFSENDVRNWCFQVFQGLACMHQRGYFHRDLKPENLLVTKDVIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHLYGSKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQHASVHLSSLIPSRSDCAISLVTSLCSWDPCKRPTASEALQHPFFQSCFYVPPSLRTRAVTRTPPSAGTRGSLDRQGLKRYSSALPNTKITNNFSSQKLHASSIVSGVQRKLDLATKDGIKNKKPLKTTTQQSKYRFTGKDSPTSLNKGRSVRGVSESAEKLANMSIGTRRQSMGQSRPSPPMKTVNWISESGNLALRSGHQNPTERSLTRKVAG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00218 453 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00218 453 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Phco8g00218 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Phco8g00218 453 MobiDBLite consensus disorder prediction 375 453 - -
Phco8g00218 453 MobiDBLite consensus disorder prediction 375 390 - -
Phco8g00218 453 Gene3D Transferase(Phosphotransferase) domain 1 84 290 - -
Phco8g00218 453 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Phco8g00218 453 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Phco8g00218 453 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00218 453 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Phco8g00218 453 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 336 - -
Phco8g00218 453 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00218 453 CDD STKc_MAK_like 4 283 - -
Phco8g00218 453 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Phco8g00218 453 MobiDBLite consensus disorder prediction 400 447 - -
Phco8g00218 453 MobiDBLite consensus disorder prediction 298 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00218 Phco-Chr8 2023917 2028616 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Phco8g00218 Pkinase 4e-74 CL0016