Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco8g00180 | ATGGAGCTATTCCCAGCACAGCTAGATTTGTCCTTGCAAATCACTCCTCCAAACAGTAAATCCACATCAAGTAATTGGAAGAGAAGCACAGAAGAGGAGATGGATTTGGGGTTCTGGAAGAGAGCTTTGGAATCCAAAACAAACACATCCTTGGTCAAAACAAACACATCCTTAGTCAAAACAGACCTCTCCCTCTCCAATCCAAGGGCTTCTTCTTCAAACACCAACACCCCCAACCCCATCCTTATCCACCACTTCCAAAACAACAACGGTAATAATAATAATAATGGCAACCCCATCCAACAAAACCATTTCTTTCACCACCAAATACATAGCCAAGACCTAGGTTTTCTGAGACCCATAAGAGGAATCCCAGTGTACCAAAATCCTCCTCTCTCGTTTCCTCATCCACAGCCCCTACTACATGCTCCATCCAACACACCCGCACCTTCAACCCCTTTCCTTTCCCAAGCTCTCATCAAGTCAAGGTTCCTCTCACGCTTTCCTCCCAAGCGTAACATGAGGGCTCCTCGGATGCGTTGGACTACCACACTCCATGCTCGCTTCGTCCATGTCGTTCAACTTTTGGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCACATGTTAAATCTCACCTGCAGATGTACCGAACAGTGAAAACTACTGATAGAGCTGCGGCATCATCGGGGCAATGTGATACTTATGATAATGGCTCTTCTGGAGATACTTCTGAAGACTTCATGATTGATACAAACTCTCCAAGGATTAGGCAGGCAAGAACAAGTCTTAATCAAGATAATGAAAATGGTTGCCTTTGGAACTCTTCAAGCAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGTTGATTCTATTGGGAACGTGCCTTCTGTTGAGGGAATGGATCCAAAGGGCCAAAGCAATGAAATATCAGATGGAAACTCATCCTCAAACACTCCAGAAGCAAGTGCCAAGAAGCCAAATTTGGATTTGGAGTTCACCTTAGGTCGATCACTTTGA | 1053 | 0.4501 | MELFPAQLDLSLQITPPNSKSTSSNWKRSTEEEMDLGFWKRALESKTNTSLVKTNTSLVKTDLSLSNPRASSSNTNTPNPILIHHFQNNNGNNNNNGNPIQQNHFFHHQIHSQDLGFLRPIRGIPVYQNPPLSFPHPQPLLHAPSNTPAPSTPFLSQALIKSRFLSRFPPKRNMRAPRMRWTTTLHARFVHVVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQCDTYDNGSSGDTSEDFMIDTNSPRIRQARTSLNQDNENGCLWNSSSREAWLHGKPKVDSIGNVPSVEGMDPKGQSNEISDGNSSSNTPEASAKKPNLDLEFTLGRSL | 350 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco8g00180 | 350 | MobiDBLite | consensus disorder prediction | 296 | 350 | - | - | |
Phco8g00180 | 350 | MobiDBLite | consensus disorder prediction | 318 | 335 | - | - | |
Phco8g00180 | 350 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
Phco8g00180 | 350 | Pfam | Myb-like DNA-binding domain | 178 | 229 | IPR001005 | - | |
Phco8g00180 | 350 | SUPERFAMILY | Homeodomain-like | 174 | 230 | IPR009057 | - | |
Phco8g00180 | 350 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 177 | 230 | IPR006447 | GO:0003677 | |
Phco8g00180 | 350 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 9 | 349 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Phco8g00180 | 350 | MobiDBLite | consensus disorder prediction | 236 | 261 | - | - | |
Phco8g00180 | 350 | FunFam | Myb family transcription factor | 175 | 233 | - | - | |
Phco8g00180 | 350 | Gene3D | - | 176 | 233 | - | - | |
Phco8g00180 | 350 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco8g00180 | Phco-Chr8 | 1593428 | 1598002 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Phco8g00180 | Myb_DNA-binding | 2.1e-05 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco8g00180 | 8 | 1593428 | 1598002 | Phco8g00180 | 8 | 1593428 | 1598002 | ECH | |
Phco4g00536 | 4 | 3859488 | 3863801 | Phco8g00180 | 8 | 1593428 | 1598002 | PCT |