Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00154 ATGGATTCCTTACCAAGAACGCATCTCTTGGGTTTGGGTTTGGGTTTGGGTTGGGAGCTAGAACCCATTCCCTCTCACACCGCCTCAAAATCTCACTCTTTCCCTTCTTTCTCTCCTCTTCTTCTTCTCCTCCTTCTTCTTCTTCAGAGTAACACACTCTCCCCCACTTCCTCAAATTCACCACAGCACACTTCTCTTCTTCAAAACACCTCCTTCAAGCTGGCGTTCCAAAACCAAACCACCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGGTTCTGGAGGCCCTGATGACACGGACAACCGGTGGCCACCGTGGCTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTCCAATGCAAGTTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGGTTACCACAAAGATCACCGTGCTATTCAGATAAGAAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGTGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAACAACAATGGCATCAGACTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGGAAGAACAATAGCAACAAGATGCAGAGTTTCACACCGTCCACCCCACCACCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 927 0.4833 MDSLPRTHLLGLGLGLGWELEPIPSHTASKSHSFPSFSPLLLLLLLLLQSNTLSPTSSNSPQHTSLLQNTSFKLAFQNQTTTVREIKPKNRRIMGSGGPDDTDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLGYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSTTMASDSEDSYSSNSSHGKNNSNKMQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00154 308 MobiDBLite consensus disorder prediction 242 308 - -
Phco8g00154 308 Pfam PLATZ transcription factor 162 233 IPR006734 -
Phco8g00154 308 CDD Bbox2 122 161 - -
Phco8g00154 308 MobiDBLite consensus disorder prediction 251 285 - -
Phco8g00154 308 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 102 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00154 Phco-Chr8 1371677 1373714 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco8g00154 PLATZ 1.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00154 8 1371677 1373714 Phco8g00154 8 1371677 1373714 ECH
Phco4g00508 4 3615905 3617597 Phco8g00154 8 1371677 1373714 PCT