Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00111 ATGGAGAAATTAGAGAAAAAGGGAAAAGAGACGAAAGAAAAGAAATGGACCCGGAAACTGGAGTTACCGTCAATAATGGGGAACCCCAAAAAAGAGGTTGCATGTGACGATGACGTACTGGGGTCGCCGAGGGATGTATTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACTGGGAGCGGCAACTGCGGTGCGCTTGGGTCGCCCGGAACTGGCCCAAATCGGGGCCAAGGGAGAGACACGCAGAACCAGCAATGGAAGACGATGATCGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACGATTCCTCTGCTTGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTTAGGAACAAGTTGGCGCGTATTCGACCCGCCAATGACGACGATGATTTAGATGTCTCTATTGACTTTGACGGCATTCCCACCAAGCCTTCTTGGAAGAACTTCAATTACGCTGAACTCGTCGCTGCAACCGACGATTTCAACCCTGAGAACATGATCGGAAAAGGTGGTCATGCTGAAGTGTACAAAGGATGCTTACCAGATGGTCGAGTTGTAGCAGTTAAGAGGCTAATGAGGAATGAAAAGGAAATTGAGGACACAGTTGGTGATTTCTTGACAGAGCTTGGAATCATTGCTCACATTAACCACCCCAATGCAACACGCTTGATAGGCTTTGGGATCGACCAAGGTCTTTTTTTTGTTCTACAATTGGCCCCACATGGCAGCCTTGCCTCTATGCTCTTTGGACCTGAATGTCTAGAGTGGAATATAAGGTTTAAAGTAGCTGTTGGGGTAGCAAAAGGATTGCACTATCTCCACCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACCACAGTAATGAAGCTGAGATTTCAGACTTTGGATTAGCAAAGTGGCTCCCAGATAAGTGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACGTTCGGTTATTTAGCTCCGGAGTACTTTATGCATGGAATAGTGGATGAGAAGATTGATGTTTTTGCATTTGGGGTATTGTTACTCGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAGCCATTTCTGGATGCAAAGTTGATCAAAGAAATGGTAGACCCCAGATTAGAAGACAAGTATGATCTGGCAGAAATGAAGTGTTGCATGGCAACGGCTTCCTTGTGTATCCATCACATGTCCTCCAAGAGGCCATACATGGATCAGGTTTTGCAGCTACTGAAAGGAGAAGAGGTGCCAATAGAACTGAACCAAAATTCACCTAGTCCAAGATCACTGTTGCTAGATGCATGTGACCTGGAAGATTACACTTGCTCTAACTATTTGAACGACCTGAATCGGCACAGGCAATTACTGATGGAGTGA 1440 0.4667 MEKLEKKGKETKEKKWTRKLELPSIMGNPKKEVACDDDVLGSPRDVFGVPVSGTDSDSTGSGNCGALGSPGTGPNRGQGRDTQNQQWKTMIDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDVSIDFDGIPTKPSWKNFNYAELVAATDDFNPENMIGKGGHAEVYKGCLPDGRVVAVKRLMRNEKEIEDTVGDFLTELGIIAHINHPNATRLIGFGIDQGLFFVLQLAPHGSLASMLFGPECLEWNIRFKVAVGVAKGLHYLHHDCPRRIIHRDIKASNILLNHSNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKIDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPFLDAKLIKEMVDPRLEDKYDLAEMKCCMATASLCIHHMSSKRPYMDQVLQLLKGEEVPIELNQNSPSPRSLLLDACDLEDYTCSNYLNDLNRHRQLLME 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00111 479 MobiDBLite consensus disorder prediction 1 20 - -
Phco8g00111 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Phco8g00111 479 Pfam Protein kinase domain 168 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00111 479 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 140 242 - -
Phco8g00111 479 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Phco8g00111 479 ProSiteProfiles Protein kinase domain profile. 165 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00111 479 MobiDBLite consensus disorder prediction 1 84 - -
Phco8g00111 479 MobiDBLite consensus disorder prediction 52 68 - -
Phco8g00111 479 SUPERFAMILY Protein kinase-like (PK-like) 149 449 IPR011009 -
Phco8g00111 479 Gene3D Transferase(Phosphotransferase) domain 1 244 445 - -
Phco8g00111 479 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 244 446 - -
Phco8g00111 479 Gene3D Phosphorylase Kinase; domain 1 139 240 - -
Phco8g00111 479 PANTHER OS08G0249100 PROTEIN 75 442 IPR046958 -
Phco8g00111 479 SMART serkin_6 165 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00111 Phco-Chr8 987662 990282 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco8g00111 Pkinase 3.1e-38 CL0016