Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00074 ATGAAGAGGGAGCGCCAACACCTTGCTTCCACCGCAGGGACCTCAAGCAGCGGCTACTGCACCGGAAAATCGAACCTCTGGGAGAAGGAAGGAGGCATGGACGAGCTTCTCGCGGTGGTGGGTTACAAGGTCAGATCTTCCGACATGGCGGAGGTGGCGCAGAAGCTGGAGCGTCTTGAAGAAGCTATGGGAAACGTTCAAGACGGTCTCAAGGAACTTTCAGATGACGCTGTACACTACAACCCCTCTGACATCTCCAACTGGCTCCAGACCATGCTTTCCAATTTCGACTCCCTTCATCAGGAAGAACCGGACAACGGCTACCCCTCTTCGGACTACGATCTCAAGGCTATACCGGGGAAAGCAATTTACGACGGAGGTGTCAGCACCACGCCAAACCCTAAGCGTCTCAAATCCGCCGAGTCAACGCACGCGTTTGTGGTTGTTGACTCGCAGGAGAACGGGATCCGCCTCGTGCACAGCCTGATGGCGTGCGCGGAGGCCGTCGAATACAACAACCTCGCCGTGGCGGAGGCGTTGGTGAAGCAGATCGGATTCCTCGCAGTGTCGCAGGTGGGAAGTATGCGGAAAGTGGCTACTTACTTTGCGGAAGCGCTGGCGAGGCGAATCTATCGCGTTTTCCCTCCCCAGCAGTCGCTCTCAGACTCTCTCCAGATTCACTTCTACGAAACCTGTCCTTACATCAAGTTTGCTCACTTCACCGCGAACCAAGCTATTTTTGAAGCCTTCCAAGGCAAGAGCCGCGTTCACGTTATAGATTTCGGAATCAACCAGGGGATGCAGTGGCCGGCACTGTTGCAGGCTCTCGCGCTTCGTCCCGGTGGCCCTCCCGCTTTCCGCCTCACCGGAATCGGACCTCCAGCAGCGGATAACTCCGACCACCTGCAGGAAGTCGGATGGAAGCTTGCACAGTTTGCGGAGACGATCAACGTGCGGTTTGAGTACCGCGGCTATGTCGCCAACAGCCTCGCGGATCTCGACGCATCCATGCTCGACCTCCGAGATGATGAGCCCGTGGCGGTTAACTCCGTCTTCGAGTTTCATAAGCTCCTCGCGCGCCCTGGCGCCGTCGAGAAGGTCCTCTCCGTTGTCCGGCAGATTCGGCCGGAGATTCTGACTGTGGTGGAGCAAGAATCGAATCACAACGGACTGAGTTTTCTTGACCGCTTCACTGAGTCGCTACACTATTATTCCACTTTGTTCGACTCGCTGGAGGGTTCGCCTGTGAATCCACAGCATAAGGCGATGTCGGAGGTTTACCTGGGAAAGCAAATCTGTAATGTGGTGGCCTGCGAAGGAACAGACCGCGTGGAACGGCACGAGACCCTGAACCAGTGGCGGAGCCGGTTCAGTTCGACCGGGTTTTCTCCGGTTCTTTTGGGTTCCAACGCGTTTAAGCAGGCTAGCATGTTGCTCGCACATTTTGCTGGTGGGGATGGGTACAGGGTGGAGGAGAACAGTGGGTGTCTCATGCTGGGATGGCACACAAGGGCCTTGATTGCCACATCCGCCTGGCAACTCGCTGAAAAATCGGTGGTTGCGGTCTGA 1569 0.5647 MKRERQHLASTAGTSSSGYCTGKSNLWEKEGGMDELLAVVGYKVRSSDMAEVAQKLERLEEAMGNVQDGLKELSDDAVHYNPSDISNWLQTMLSNFDSLHQEEPDNGYPSSDYDLKAIPGKAIYDGGVSTTPNPKRLKSAESTHAFVVVDSQENGIRLVHSLMACAEAVEYNNLAVAEALVKQIGFLAVSQVGSMRKVATYFAEALARRIYRVFPPQQSLSDSLQIHFYETCPYIKFAHFTANQAIFEAFQGKSRVHVIDFGINQGMQWPALLQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQFAETINVRFEYRGYVANSLADLDASMLDLRDDEPVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPEILTVVEQESNHNGLSFLDRFTESLHYYSTLFDSLEGSPVNPQHKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRSRFSSTGFSPVLLGSNAFKQASMLLAHFAGGDGYRVEENSGCLMLGWHTRALIATSAWQLAEKSVVAV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00074 522 MobiDBLite consensus disorder prediction 1 21 - -
Phco8g00074 522 Pfam Transcriptional regulator DELLA protein N terminal 34 98 IPR021914 -
Phco8g00074 522 FunFam DELLA protein GAI 32 96 - -
Phco8g00074 522 SMART DELLA_2 34 106 - -
Phco8g00074 522 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 111 509 IPR005202 -
Phco8g00074 522 Coils Coil 49 76 - -
Phco8g00074 522 ProSiteProfiles GRAS family profile. 149 513 IPR005202 -
Phco8g00074 522 Pfam GRAS domain family 158 513 IPR005202 -
Phco8g00074 522 Gene3D - 32 96 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00074 Phco-Chr8 650023 651591 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco8g00074 GRAS 8.8e-135 CL0063