Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00071 ATGAACTTCAGGAACTACGATGATAATAACTCCACTTGGGATGCCATCCATGGGAAGACACCGGCAAATGTTGGTTCTCTGCTGAGACAGTCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGGATTGGGAAGGAATTTGGGTCTATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCAGCTGGTACAGGAGAAGGTCACAACCATAACCCAATTAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTCATCAAAGATAGTGGTGGGGCCAACGATGGGAGTGGCAATGGTGGTTCGTCCATTCCTCAAAGTCAACCAACATTGGGAGAAATGACTTTAGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTGACTTTCCTAGACCAAACAATAACAATGGCCTAGTTCTTGGATTCCAACAACCAAACAGAAGTAATAGGAATTTGGGTGAGAGGGTGGTGGAGAACAACAACAACAACTTAGCTCCCAAACAACCTCCTTTATCACTAAACTCAAACCACTCTCAACGACCAACACAACAGCAACCACCACTTTTTCCAAAGCCATCAAATGTAGCTTTTGCTGCTCCTATACATTTGTTGAACAGTGCTCCACTTGCTAGCCCTGCCAGAAGAGGAGGGTTGATTGAGCATTCACTGAATGTTGGAATGGTTGGTTTAGCCTCGGCTAATCCAGAGGCTTCTCCCTCCAGGAAAATATCATCAGATGTAATTTCAAGAAGTAATGTAGACAACTCTTCACTGTCGCCAGTTCATTATGCAATCAACAGGGGAAGGAAATGCAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATCAAAAATAGAGAATCAGCTGCCAGGTCACGGGCTCGTAAGCAGGCCTACACTTACGAACTAGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTGCAAAGAAAACAGGCAGAGATTAAGGAAATGCATAAAAATAAGGATTTGGACCCTGCATGCCAGCCAAGGGTAAGTACTAGAATACAATGCTTGAGAAGGACACTTACAGGACCATGGTAG 1224 0.4371 MNFRNYDDNNSTWDAIHGKTPANVGSLLRQSSVYSLTFDEFQSTMGGIGKEFGSMNMDELLKNIWTAEETQALAFSAGTGEGHNHNPISGGLQRQGSLTLPRTLSQKTVDEVWRDFIKDSGGANDGSGNGGSSIPQSQPTLGEMTLEEFLVRAGVVREDVPQQQIGKPNNNGWFGDFPRPNNNNGLVLGFQQPNRSNRNLGERVVENNNNNLAPKQPPLSLNSNHSQRPTQQQPPLFPKPSNVAFAAPIHLLNSAPLASPARRGGLIEHSLNVGMVGLASANPEASPSRKISSDVISRSNVDNSSLSPVHYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTYELEAEVAKLKEINRELQRKQAEIKEMHKNKDLDPACQPRVSTRIQCLRRTLTGPW 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00071 407 Coils Coil 351 381 - -
Phco8g00071 407 SMART brlzneu 324 388 IPR004827 GO:0003700|GO:0006355
Phco8g00071 407 MobiDBLite consensus disorder prediction 160 195 - -
Phco8g00071 407 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 326 383 - -
Phco8g00071 407 Pfam bZIP transcription factor 328 381 IPR004827 GO:0003700|GO:0006355
Phco8g00071 407 Gene3D - 326 383 - -
Phco8g00071 407 MobiDBLite consensus disorder prediction 163 195 - -
Phco8g00071 407 MobiDBLite consensus disorder prediction 208 241 - -
Phco8g00071 407 MobiDBLite consensus disorder prediction 125 141 - -
Phco8g00071 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Phco8g00071 407 CDD bZIP_plant_BZIP46 328 378 - -
Phco8g00071 407 SUPERFAMILY Leucine zipper domain 328 377 IPR046347 GO:0003700|GO:0006355
Phco8g00071 407 MobiDBLite consensus disorder prediction 117 141 - -
Phco8g00071 407 MobiDBLite consensus disorder prediction 208 232 - -
Phco8g00071 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 377 IPR004827 GO:0003700|GO:0006355
Phco8g00071 407 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 407 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00071 Phco-Chr8 629254 631325 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco8g00071 bZIP_1 1.7e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00071 8 629254 631325 Phco8g00071 8 629254 631325 ECH