Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00043 ATGGGAGTTTGCACATCGAAGCCGCAGAAGGCGAATCCTTACGCGCTTCGCGAAGCTGAAGGCGAAGGCGACCCTTCGCAAATCCCGAAAGCCCCAATTAGTCCCGCTGGCGCCGAGAACCACCGCCGGAAAGATGACGTCACCGCCGGAAAACAGTCTCCGTTCTTCCCGTTCTACAGCCCGAGCCCGGCGCGCTTCCTGAAGAAGTCTCCGGCGCCGGCGGGAGGGAGCAGGAGCGCGGCCTCCACGCCGAGGAGGTTCTTCAAGCGGCCGTTCCCTCCGCCGTCGCCGGCTAAGCACATAAGGGCTGTGCTGGCGCGGCGACAGGGGAAGAAGGCGGCTGCGGCGATATCGGAGGAGGGGGAGGATGGCGATGGAGGTGCGGCGGATTTGGACAAGAGGTTTGGGTTCTCTAAGGAGTTCACTAGTAGGTTGGAAGTTGGTGAAGAAGTGGGTCGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTCAAGAAGGGTGAGCTTAAGGGTCAACAAGTGGCTGTTAAGGTCATACCAAAAGCAAAGATGACAACAGCAATTGCTATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGACACAGCAATTTGATACGGTTCTATGATGCATTTGAAGACCAAGATAACGTGTACATTGTAATGGAGTTGTGTGAAGGGGGGGAGCTCTTAGATATGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTAATGGTGCAGATACTAAATGTCGTTGCATTTTGTCATCTTCAGGGTGTTGTGCACCGAGATCTTAAGCCAGAGAATTTTTTGTACACTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCGTACTATGTGGCTCCTGAGGTTCTCCATAGATCTTATAGCACAGAGGCTGATGTGTGGAGTATAGGCGTGATAGCATATATTCTTTTATGTGGTAGTCGTCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAGGGCAGTTCTGAAAGCTGATCCTGGCTTTGATGAAACACCGTGGCCATCTTTATCTTCAGAAGCAAAGGATTTTGTGAAACGCTTACTGAATAAGGACCCTCGGAAGCGGATATCTGCTGCTCAGGCTCTAAGTCATCCTTGGATACGGAATTACAATAATGTAAAAGTTCCACTTGATGTTTTAATATTTAAGCTCATGAAGACATATATGAGATCATCATCCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAAACATTGACTGCAGATGAACTCTATTATCTGAGGGAGCAATTTTCACTGCTAGAACCTAGCAAAAATGGCAGCATATCTTTAGAGAATGTTAACAAGGCCTTGATGAAATATGCAACATATGCCATGAAAGAGTCTCGCATCCCTGACTTTCTTTCCTCGCTTAATTCATTACAATATAGAAGGATGGATTTTGAAGAATTCTGTGCAGCTGCGTTAAGTGTGCATCAACTTGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGTGCCTATGAGCTTTTTGATAAAGATGGAAACAGGGCTATTGTCATTGAAGAGCTTGCTTCAGAACTTGGACTTGGCCCCTCTATCCCTGTTCATGTTGTTCTTCACGACTGGATACGCCACACTGATGGAAAATTAAGCTTTCTTGGGTTTGTCAAATTATTGCACGGTGTATCTAGCCGAAGCCTTGCGAAGGTTCAATAA 1800 0.4661 MGVCTSKPQKANPYALREAEGEGDPSQIPKAPISPAGAENHRRKDDVTAGKQSPFFPFYSPSPARFLKKSPAPAGGSRSAASTPRRFFKRPFPPPSPAKHIRAVLARRQGKKAAAAISEEGEDGDGGAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLIRFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTKKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDETPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDVLIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFSLLEPSKNGSISLENVNKALMKYATYAMKESRIPDFLSSLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00043 599 FunFam Calcium-dependent protein kinase SK5 317 412 - -
Phco8g00043 599 FunFam CDPK-related kinase 1 138 233 - -
Phco8g00043 599 SUPERFAMILY EF-hand 435 589 IPR011992 -
Phco8g00043 599 Gene3D - 432 586 - -
Phco8g00043 599 ProSiteProfiles Protein kinase domain profile. 145 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00043 599 SUPERFAMILY Protein kinase-like (PK-like) 141 450 IPR011009 -
Phco8g00043 599 Gene3D - 425 516 - -
Phco8g00043 599 ProSitePatterns Protein kinases ATP-binding region signature. 151 177 IPR017441 GO:0005524
Phco8g00043 599 CDD STKc_CAMK 146 406 - -
Phco8g00043 599 FunFam CDPK-related kinase 3 137 309 - -
Phco8g00043 599 SMART serkin_6 145 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00043 599 MobiDBLite consensus disorder prediction 1 94 - -
Phco8g00043 599 FunFam CDPK-related kinase 1 443 516 - -
Phco8g00043 599 Gene3D Phosphorylase Kinase; domain 1 147 233 - -
Phco8g00043 599 Pfam Protein kinase domain 146 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00043 599 Gene3D Transferase(Phosphotransferase) domain 1 234 420 - -
Phco8g00043 599 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 574 - -
Phco8g00043 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00043 Phco-Chr8 385082 389299 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco8g00043 Pkinase 6e-72 CL0016