Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g03083 | ATGGAGAAACAAAGCAGTTTTCGAGCATCTACTATGGAAAAACAGAAGAGTTTTCGTGGATTTATGGAAAAACAGAAGAGTTTTCGCATAGCGATGGAGAAGCAGCTCAGCTTTATTGGAAGTGAAAGGAAGAAGAGCAAGGAATCACCTGGGAAACGTGGTGACTTACCAATTCATTTAGCAGCTCGGGCAGGAAACTTGAGCAGAGTGAAAGAGATAATTCAAAACTATTCTAATTGTGAGACGAAAGATTTGTTGGCAAAGCAGAACCTAGAGGGGGAGACCCCTCTTTATGTCGCTTCAGAGAATGGGCATGCTTTGGTTGTTAGTGAGATACTGAAGTACTTGGACCTGCAAACTGCTTCTATTGCGGCCAGAAATGGCTATGATCCATTCCATATTGCTGCAAAGCAAGGTCATCTTGAGGTGCTGAGAGAGCTACTGCACTCCTTTCCCAACTTGGCCATGACCACTGATTTGTCCAACTCAACTGCTTTACATACAGCTGCAAGTCAAGGTCATATTGATGTGGTTAATCTCCTTCTGGAATCAGATTCTAACCTTGCTAAAATAGCCAGGAATAATGGTAAAACTGTCCTTCACTCTGCGGCTAGGATGGGGCACTTGGAAGTTGTGAATGCTTTATTGAACAAGGATCCAAGCACTGGATTTAGGACTGATAAGAAAGGCCAAACTGCACTACACATGGCTGTGAAAGGGCAAAATGAAGAAATTTTGCTGGAATTGGTAAAACCTGATCCAGCAGTTTTACACTTGGAAGATAATAAAGGAAATACAGCATTGCATATTGCCACAAAGAAGAGCCGTACACAGAATGTTCGCCGCTTGTTATCAATGGAGGGTATCAACATCAATTCAACAAACAAGGCTGGAGAGACTCCTCTTGATGTTGCAGAAAAATTTGGAAGTCCTGAACTTGTCTCCATATTGAGGGATGCTGGGGCTGCTAATTCCACTGACCAAGGGAAACCTCCAAATGCTTCAAAACAACTGAAGCAGACTGTCAGTGACATAAAGCACGATGTACAGTCCCAACTCCAACAGACACGTCAGACTGGCATGAGGGTTCAGAAAATTGCAAAGAAGCTGAAAAAGCTACACATCAGTGGCCTGAACAATGCAATAAACTCTGCTACTGTTGTTGCCGTTCTTATTGCTACAGTTGCTTTTGCAGCCATCTTCACTGTCCCTGGTCAATATGTCGAAAACAAAACAGATGGATTTTCTCTTGGACAAGCAAATATAGCAAACAATGCAGCTTTCCTAATATTTTTTGTGTTTGACAGCCTGGCATTGTTCATCTCTCTGGCAGTTGTAGTGGTTCAAACTTCCGTAGTTGTTATTGAGCAAAAGGCAAAAAAGCAGCTTGTTTTTGTCATTAACAAGCTCATGTGGATGGCTTGCCTTTTCATTTCCATTGCCTTCATTTCTCTTACATACGTGGTGGTGGGATCACACTCCAGATGGCTTGCAATATATGCTACAGTGATTGGAAGTTTGATAATGCTCTCTACAATTGGCTCCATGTGCTATTGTGTAATTTTGCATAGGATGGAGGAGACAAAACTGAGGACCGAGAGTCGATCGTTTTCCATGTCTCATGCATCAGACCAAGAGATTTTAAACAGTGAATACAAGAGGATATACCGTGAGAACAGAGGGAAAGGAAGAAAAATGGGTGGGGAATTCTCGCCACGTCCACTCAAAGGCTATATAGTTCCGAGTATGTCCCTGGATTCGGAGACATCGGGTTCCGGCAGGGACTGGTTCTTCCCGTCGCCATCGTTCTTGCGGTCCTCTTCTTCGCAGTATGGCCATCGATTCTATTCAAATTCAAAGCCTTACACCCCTCCTACCCTCACTCGCATCCGTCATCGCCGTAGAGTTAAATTCCCCCGGACTCACACTCTCACTAACGACAAACCTCAGGTTTCCGACACTGAAAACGTTAAGTCATCTGCCAACAGTAACCTTATATTCCGTTCGCAATCTCGTTTCCAGTTTGCTCTCGTGACGTTGACTATTGTTTTCTTTTTGCTTCTGCTACTGCTGCTCCTCCGTAATGCGCATCTAGAAAGTCAACTCACTAAGTTGCAGGGTGATATTCTCGGCCTTAATCTCATATTACACGCGTGCCACCAATTGGACACCTTCAACGTGACAAGTTCCTCATCTCAAGACGCTAATCCTGGGTTACGCGATAATTTCAAAAGAAATCTAGCTCTTTTTTTCTCCTTCATACTTCTTTTTATCCCTCTCATTATTTTCAAGTACATAGACTATGTGTCGAAATCAATATTTTCTGACAATTTATCTGAAAGAGTTTCTCTAAACAAGCAACTAGCATATCGGGTTGATGTCTTTTTATCGGTTTACCCGTATGCTAAACCCCTCGTGTTGTTAGTGGCAACGGTGTTGCTAATTTTACTTGGAGGATTGGCCCTTTTTGGGGTAACTACCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCTACGTTGCTGATTCTGGCAATCATGCCAGCTCTCAAGGTATTGGTCCAAGGTTAGTTGCGATTTCCATTAGCTTTGGTGGGATGCTTATATTCGCAATGATGCTTGGACTTGTGTCCGACGCAATATCTGAGAAATTTGACTCGCTGAGGAAAGGAAAAAGCGAGGTGGTTGAGCAAAATCATACTTTAATTCTTGGTTGGAGTGATAAATTGGGTTCATTACTAAATCAGCTTGCCATAGCCAATGAGAGTCTGGGTGGAGGAACTGTTGCAGTGATGGCTGAGCGAGACAAGGAAGAAATGGAGCTTGATATTGCAAAGATGGAGTTTGATTTCAAAGGAACATCTGTCATATGCAGAAGTGGCAGCCCTCTGATTCTGGCTGATCTGAAAAAGGTTTCTGTTTCAAAAGCACGTGCTATAATAGTCCTTGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGAGCATTGAGAACAGTCTTAAGTCTGACTGGAGTAAAAGAAGGATTACGAGGGCACATAGTGGTTGAAATGAGTGATCTAGACAATGAGGTCCTTGTTAAACTTGTGGGTGGTGATCTTGTTGAAACTGTTGTAGCTCATGATGTCATTGGTCGGTTGATGATTCAGTGTGCTCGGCAGCCTGGACTTGCACAGATTTGGGAAGACATACTAGGATTTGAAAATTGTGAATTCTACATCAAAAGATGGCCACAGTTGGAAGGCATGCAATTTGAGGATGTATTAATCAGCTTTCCTGCTGCAATTCCTTGTGGAATCAAAGTTGCATACAGTGGTAAAATTATTTTGAATCCAGATGACTCCTATGTTCTACAAGAAGGTGATGAGATTCTGGTTATTGCAGAGGATGATGATACATATGCCCCAGCATCCTTGCCTACGGTTTGGAGGGGAAGCTTGCCCAAGGACTTTGTTTATCCAAAATCTCCTGAGAGAATCCTTCTTTGTGGTTGGAGGCGTGATATGGAGGATATGATCATGGTTTTGGATGCATCTTTAGCACATGGATCAGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAAAGAGAAAAGAAGCTAACTGATGGTGGCCTTGACATAAATCGATTAGAAAACATATCTCTGGTTAATCGTGATGGGAATGCTGTTATACGCCGCCACTTGGAAAGCCTTCCTTTGGAATCATTTGATTCAATATTGATTTTGGCTGATGAATCAGTAGAGGATTCAGCAATTCAAGCTGACTCTAGATCTCTTGCCACTCTACTTTTAATTCGTGACATACAAGCTAGGCGTCTTCCTTATGTAGCTATGGCCAGTCAAACTCATGGAGGAAGCTTCTCTAAAGGCTCATGGATTGGGGAAATGAAGCAGGCTTCTGATAAAACTGTTATAATTAGTGAAATTTTGGATCCTAGGACAAAAAATCTTCTCTCCATGTCAGGGATCAGTGATTATGTCTTATCAAATGAACTTGTGAGCATGGCTTTGGCCATGGTTGCAGAAGATCGGCAGATAAATGATGTATTGGAGGAGCTCTTTGCGGAGGAGGGAAATGAGATGCATATAAGGCCTGCAGATCCATACCTTTGTGAAGGTGAAGAATTGAGTTTCTATGAAATAATGTTACTAGCTAGGCAGAGAAGAGAGATTGTGATTGGCTACCGTTTAGCAAATGCAGAAAGGGCAGTGATTAACCCCCCAGTGAAAACTGATAGACGGAAGTGGTCATTGAAGGATGTTTTTGTGGTGATTACTGAAAAGGAATGA | 4293 | 0.4258 | MEKQSSFRASTMEKQKSFRGFMEKQKSFRIAMEKQLSFIGSERKKSKESPGKRGDLPIHLAARAGNLSRVKEIIQNYSNCETKDLLAKQNLEGETPLYVASENGHALVVSEILKYLDLQTASIAARNGYDPFHIAAKQGHLEVLRELLHSFPNLAMTTDLSNSTALHTAASQGHIDVVNLLLESDSNLAKIARNNGKTVLHSAARMGHLEVVNALLNKDPSTGFRTDKKGQTALHMAVKGQNEEILLELVKPDPAVLHLEDNKGNTALHIATKKSRTQNVRRLLSMEGININSTNKAGETPLDVAEKFGSPELVSILRDAGAANSTDQGKPPNASKQLKQTVSDIKHDVQSQLQQTRQTGMRVQKIAKKLKKLHISGLNNAINSATVVAVLIATVAFAAIFTVPGQYVENKTDGFSLGQANIANNAAFLIFFVFDSLALFISLAVVVVQTSVVVIEQKAKKQLVFVINKLMWMACLFISIAFISLTYVVVGSHSRWLAIYATVIGSLIMLSTIGSMCYCVILHRMEETKLRTESRSFSMSHASDQEILNSEYKRIYRENRGKGRKMGGEFSPRPLKGYIVPSMSLDSETSGSGRDWFFPSPSFLRSSSSQYGHRFYSNSKPYTPPTLTRIRHRRRVKFPRTHTLTNDKPQVSDTENVKSSANSNLIFRSQSRFQFALVTLTIVFFLLLLLLLLRNAHLESQLTKLQGDILGLNLILHACHQLDTFNVTSSSSQDANPGLRDNFKRNLALFFSFILLFIPLIIFKYIDYVSKSIFSDNLSERVSLNKQLAYRVDVFLSVYPYAKPLVLLVATVLLILLGGLALFGVTTEDLAHCLWLSWTYVADSGNHASSQGIGPRLVAISISFGGMLIFAMMLGLVSDAISEKFDSLRKGKSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGTVAVMAERDKEEMELDIAKMEFDFKGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVEMSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLEGMQFEDVLISFPAAIPCGIKVAYSGKIILNPDDSYVLQEGDEILVIAEDDDTYAPASLPTVWRGSLPKDFVYPKSPERILLCGWRRDMEDMIMVLDASLAHGSELWMFNDVPEKEREKKLTDGGLDINRLENISLVNRDGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQARRLPYVAMASQTHGGSFSKGSWIGEMKQASDKTVIISEILDPRTKNLLSMSGISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRPADPYLCEGEELSFYEIMLLARQRREIVIGYRLANAERAVINPPVKTDRRKWSLKDVFVVITEKE | 1430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 195 | 227 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | Gene3D | - | 30 | 346 | IPR036770 | - | |
| Phco7g03083 | 1430 | Pfam | Ankyrin repeats (many copies) | 258 | 305 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 53 | 85 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 92 | 128 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | Pfam | Domain of unknown function | 377 | 489 | IPR026961 | - | |
| Phco7g03083 | 1430 | Pfam | Ankyrin repeats (3 copies) | 111 | 187 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | Pfam | Ankyrin repeats (3 copies) | 193 | 251 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SUPERFAMILY | Ankyrin repeat | 57 | 322 | IPR036770 | - | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 127 | 159 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 161 | 193 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 161 | 188 | - | - | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 263 | 296 | - | - | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 195 | 218 | - | - | |
| Phco7g03083 | 1430 | Gene3D | - | 1158 | 1354 | - | - | |
| Phco7g03083 | 1430 | PANTHER | ION CHANNEL POLLUX-RELATED | 671 | 1429 | IPR044849 | GO:0006811 | |
| Phco7g03083 | 1430 | Pfam | Castor and Pollux, part of voltage-gated ion channel | 1041 | 1137 | IPR010420 | - | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 127 | 148 | - | - | |
| Phco7g03083 | 1430 | ProSiteProfiles | Ankyrin repeat profile. | 263 | 296 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | Gene3D | - | 890 | 1035 | - | - | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 127 | 156 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 161 | 190 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 229 | 259 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 263 | 293 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 297 | 327 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 195 | 224 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 92 | 121 | IPR002110 | GO:0005515 | |
| Phco7g03083 | 1430 | SMART | ANK_2a | 53 | 82 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g03083 | Phco-Chr7 | 49266455 | 49285695 | Dispersed/Transposed |