Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03058 ATGGTGGAGTTTCGAAGGTTGTTGCTGTGCATCACTACCTGCATTCTTTGTTGGATGCCCAATGGTGCTGCTGTCTCCACAGATCCAAATGATGCTTCTGCTGTGAGATTTTTGTTTCAAAATATGAACTCACCATCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGGTCGTTGCCTTACGGATTACAAGTCTTGACATCTTTGATCAGCCTAGACATGAGTAGCAATAGTCTTGGCGGCAGCATACCATACCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTTATAATAACATCACAGGGACAGTTCCTTACTCTATTTCAAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTGTCTTTCAATTCTCTAACAGGTGACCTCCCTCAGACTATGAGTTCACTTTCACACATAACAACCATGAATCTACAAAACAATCAGTTTACAGGCACTATTAATGTCCTCGCTAATCTTCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCGGAACAGTTGAAGAACATAAACCTACAGAGCGGTGGTAATGGATGGAGCTCTGGATCTGCACCCCCCCCTCCTCCTGGGACGCCTCCTGTACCTAAAAGCAACAAACACAAGTCTGGGGGGGGAAGAACCACCTCGTCATATGTTGGCAGTAGCAGCAGCTCAGTTGATGGGAGCAAAAAGTCTGGTATAGGAGGTGGTGCCATAGCTGGAATTGTGATCTCTGTCATAGTCGTTGGGGCAATAGTAGCGTTCTTCCTGGCGAGGAGAAAATCCAAGAAGACATCTTCAGATTTAGAAAAGCTGGACGATCAGTCCTTTGCTCCTCTTCCTTCAAATGGAGTTCATGAAGAGAAGTCTGAGCAAACATCCTCTGTATCTGACTTGAAGACATTTGATACTTCCGCCTCAATAAATCTTAAACCCCCGCCTATTGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCAGCAAATGTGAAATCATACTCTATAGCTGACCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGACGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCCAATGATTTGTCAGATGATTTTTTAGAAATAATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTTTCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGTACTGCACGTGCTTTAGAGTACCTACATGAAGTTAGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCAGCGAACATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGCTATATTCCAAACGCAGACCAGATATTGAGTCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGTGGACGGAAGCCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGGTAAAATGGTTGATCCTACATTGAAGGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATCGCCCTTTGCGTGCAGCCGGAGCCCGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGCAGTAGTGATCATGGAGGATCCCAACGAGGAAGTGATGAGGCAGCTCTACGGGAAATCTAA 2163 0.4364 MVEFRRLLLCITTCILCWMPNGAAVSTDPNDASAVRFLFQNMNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLISLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDLPQTMSSLSHITTMNLQNNQFTGTINVLANLPLDNLNVENNNFTGWIPEQLKNINLQSGGNGWSSGSAPPPPPGTPPVPKSNKHKSGGGRTTSSYVGSSSSSVDGSKKSGIGGGAIAGIVISVIVVGAIVAFFLARRKSKKTSSDLEKLDDQSFAPLPSNGVHEEKSEQTSSVSDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIADLQIATGSFSVDHLVDEGSFGRVYRAQFDDGEVLAVKKIDSSVLSNDLSDDFLEIISNISILHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQILSHNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALGKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEAALREI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03058 720 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
Phco7g03058 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Phco7g03058 720 Gene3D Phosphorylase Kinase; domain 1 376 491 - -
Phco7g03058 720 Gene3D Transferase(Phosphotransferase) domain 1 493 708 - -
Phco7g03058 720 MobiDBLite consensus disorder prediction 237 286 - -
Phco7g03058 720 PANTHER LEUCINE RICH REPEAT KINASE 2 70 694 - -
Phco7g03058 720 Gene3D Ribonuclease Inhibitor 181 243 IPR032675 -
Phco7g03058 720 MobiDBLite consensus disorder prediction 698 720 - -
Phco7g03058 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Phco7g03058 720 SUPERFAMILY L domain-like 28 232 - -
Phco7g03058 720 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g03058 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Phco7g03058 720 Gene3D Ribonuclease Inhibitor 36 180 IPR032675 -
Phco7g03058 720 MobiDBLite consensus disorder prediction 323 355 - -
Phco7g03058 720 Pfam Protein tyrosine and serine/threonine kinase 417 686 IPR001245 GO:0004672|GO:0006468
Phco7g03058 720 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03058 Phco-Chr7 49157299 49165243 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phco7g03058 PK_Tyr_Ser-Thr 1.9e-39 CL0016