Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03046 ATGGCAAGCCTTCCAAATGCAACGTTCAATGGTGGAGAGAAGAGGAAGGAAGCAGAAGAAGTACAAGATGAAGAAAGCTTCTTGCGTGCCTTACAGCTTACGAGTTCAATGGTCCTTTCGATGGCACTGCAATCGGCCACGGAGCTGGGTGTGTTTGAGGTGCTGAAGGAAGCGGGTGAAGGTGCTAAGCTGTCTGCTAAGGATATAGCATCAAAGATTTGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCCTCTCACTCCATTCTTAACTCTTCTCTCGTTTCCGACCACCATGTCCCTCCCAACTTTCACAGGCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCCTCCAATTCTGATGGAGTTTCGTTGGGACCCTTGATGGCCTTACTCCAAGACAAAATCTTCCTACAAAGCTGGAGTGAGCTGAAAGATGCAATTAGGGAGGGGGGTGTTCCATTCAACAGGGTTTATGGCACTCATGCTTTTGACTATCCACGTTTGGACTCAAGGTTCAATAAAGTTTTCAACACAGCAATGATCAATCACACCACTTTGGTGACGAAGAAGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTCGACTTGCCTCATGTCATTCAAAATGCTCCTTCTTATCCTGGAGTTGAACACGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATAGTTCATGATTGGAGTGATGAACATTGTCTGAAGCTGCTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAGTTCTTCCAAAGATACCAGAGAATAATGATGCTTATAAGGCGGTTTCACAAATGGATGTTTTGATGATGACTCAGAACCCTGGAGGTAAAGAGCGATGTGAAAGAGAGTTCATGGAATTGGCAAGTGCAGCTGGATTTAGTGGCATCAGATATGAATGTCAAGTCAATATTTTCTGGGTTATGGAGTTCTTCAAGTAG 1119 0.4468 MASLPNATFNGGEKRKEAEEVQDEESFLRALQLTSSMVLSMALQSATELGVFEVLKEAGEGAKLSAKDIASKICCSNPEAASMLDRLLALLSSHSILNSSLVSDHHVPPNFHRLYTITPVAAFFASNSDGVSLGPLMALLQDKIFLQSWSELKDAIREGGVPFNRVYGTHAFDYPRLDSRFNKVFNTAMINHTTLVTKKVLESYKGFEGIKRLVDVGGGLGININLITSKYPHIHGINFDLPHVIQNAPSYPGVEHVGGDMFENVPKGDAIFMKWIVHDWSDEHCLKLLKNCYDAIPDDGKVIVVEAVLPKIPENNDAYKAVSQMDVLMMTQNPGGKERCEREFMELASAAGFSGIRYECQVNIFWVMEFFK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03046 372 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
Phco7g03046 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Phco7g03046 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Phco7g03046 372 Gene3D - 8 124 IPR036388 -
Phco7g03046 372 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g03046 372 PIRSF O-mtase 9 372 IPR016461 GO:0008168
Phco7g03046 372 FunFam Caffeic acid 3-O-methyltransferase 10 124 - -
Phco7g03046 372 FunFam Caffeic acid O-methyltransferase 125 372 - -
Phco7g03046 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Phco7g03046 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 370 IPR029063 -
Phco7g03046 372 PANTHER O-METHYLTRANSFERASE 31 357 IPR016461 GO:0008168
Phco7g03046 372 SUPERFAMILY "Winged helix" DNA-binding domain 22 127 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03046 Phco-Chr7 49027942 49030692 Dispersed/Tandem