Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03044 ATGCGAGGAGTCCATGATCAACAACTATCCATGTCATGTGTGGATCAGATCAAACAAGCAGTTGAGCTTAGCCGCAAAGAACTTCGAAAAATTCTTGCACACATGTGCCGATCAAAAGCTCAGCTCAAGGCTGGGGGACTCTATACCATCCCAGGTGTTCAAGTGGAGATGGCAAGTCTTCCAGATTCAAGGCTGAATGGTGAAGAGAAGAGGAAGGAAGAAGAAGAAATAGAAGATGCAGAAAGCTTCTCGCGTGCCATGCAGCTTGCGACTTCCATGGCCCTTTCGATGGCAGTGCAATCTGCGACGGAGCTGGGAGTGTTTCAGGTGCTGAAGGAAGCGGGTGAAGGTGCTAAGCTGTCTGCTAAGGATATAGCATCAAAGATTTGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCCTCTCACTCCATTCTTAACTCTTCTCTCATTTCCGACCACCGTGTTCCTCCCACCGTTCACAGGCTCTACACCATCACTCCCGTCGCCGCATTCTTTGTTCCCAATTCTGATGGAGTTTCGTTGGGACCCTTGGTGGCCTTAAGCCTAGACAAAATCTTGCTACAAAACTGGACGGAGCTGAAAGATGCAATTAGGGAGGGGGGTATTCCATTCAAGAGGGTTTACGGCACTCATGTTTTTGAGTATCCACGTTTGGACTCAAGATTCAATAAAGTTTTCAACACAGCAATGATCAATCACACCACTTTGGTGATGAAGAAGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTCGACTTGCCTCATGTCATTCAAGATGCTCCTTCCTATCCTGCACTGGTGCAGAAACGAGTGGAACACGTTGAGGGAGACATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAAGTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAATTCTTCCAAAAATACCAGAGACTAGTAATGCTTATAAGGCAGTTGCACAATTAGATGTTGCAATGATGACTGTGTACCAGGGAGGTAAAGAGCGATGTGAAGAAGAGTTCATGAAATTGGCAAGAGCAGCTGGATTTAGTGGCATCAGATATGAATGTCATGTCAACAATCACTGGGTTATGGAGTTCTTCAAGTAG 1302 0.4516 MRGVHDQQLSMSCVDQIKQAVELSRKELRKILAHMCRSKAQLKAGGLYTIPGVQVEMASLPDSRLNGEEKRKEEEEIEDAESFSRAMQLATSMALSMAVQSATELGVFQVLKEAGEGAKLSAKDIASKICCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTVHRLYTITPVAAFFVPNSDGVSLGPLVALSLDKILLQNWTELKDAIREGGIPFKRVYGTHVFEYPRLDSRFNKVFNTAMINHTTLVMKKVLESYKGFEGIKRLVDVGGGLGININLITSKYPHIHGINFDLPHVIQDAPSYPALVQKRVEHVEGDMFENVPKGDAIFMKWILHDWSDEHCVKVLKNCYDAIPDDGKVIVVEAILPKIPETSNAYKAVAQLDVAMMTVYQGGKERCEEEFMKLARAAGFSGIRYECHVNNHWVMEFFK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03044 433 Pfam Dimerisation domain 97 147 IPR012967 GO:0046983
Phco7g03044 433 PANTHER O-METHYLTRANSFERASE 86 418 IPR016461 GO:0008168
Phco7g03044 433 CDD AdoMet_MTases 268 366 - -
Phco7g03044 433 FunFam Caffeic acid 3-O-methyltransferase 64 180 - -
Phco7g03044 433 MobiDBLite consensus disorder prediction 63 79 - -
Phco7g03044 433 SUPERFAMILY "Winged helix" DNA-binding domain 78 183 IPR036390 -
Phco7g03044 433 Gene3D - 63 180 IPR036388 -
Phco7g03044 433 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 87 433 IPR016461 GO:0008168
Phco7g03044 433 FunFam Caffeic acid O-methyltransferase 181 433 - -
Phco7g03044 433 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 185 431 IPR029063 -
Phco7g03044 433 Pfam O-methyltransferase domain 205 415 IPR001077 GO:0008171
Phco7g03044 433 Gene3D Vaccinia Virus protein VP39 182 433 IPR029063 -
Phco7g03044 433 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03044 Phco-Chr7 49006689 49020271 Tandem