Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03039 ATGCGCCACTTCATTTGGGAGGTATTGGTTACCACTGTGACACGTGGAATGCATTATGTATATTCATTCCTGCTTCCGTCAGCCATCAGAAGCGACGAAGAAGAAGAAGCAGAGATGCAGAGAGTCTTTGTTCAGTCCAAAACCCTAATCACGGTTGCTTCCAATTGCATCTTCTTCCTTCCATCACTACCCCTTTACCTGCAAAACCCAAAGCAACAACAAGCCTTTCACAGCAACAGTGGTAACACCCCTTTCGGATCACCAACTCGAGTTCAGAAGCTGATAGCTTCCCAATCAGACCCTCTTCTGGCCAAAGAAATCTTCGATGTGGCCTCTCGCCAACCTAACTTCCGCCACACTTACTCAACCTATCTCATTCTCATCCTCAAGTTGGGTCGCTCCAAACACTTCTCTTTCATCGACCATCTCCTCCGCTGCCTCAGATCCGATTCTCAACCCATCACCCCCACCCTCTTCACTTACTTGATCAGAGTCTACACAGAAGCCGATTTGCCCGACAAAGCCCTCAAAACCTTCTACAACATTCTCCACTTCAATTGCAAGCCTTTGCCCAAACACCTTAACCGCATTCTTGAGCTCCTCGTTTCCCACCGCAATTACATTCGTCCCGCCTTCCTTCTCTTCAAGGATGCTCACAGGTATGGGGTGGAACCCAACACCAAGTCCTACAACATTCTCATGCGCGCGTTCTGTCTCAATGGGAACATTAGCATTGCCTACTCACTGTTCAACAAAATGTTCAAACGAGATGTTGTGCCGGATATCGAGTCTTACCGGATTTTGATGCAGGCCTTGTGTCGGAAGAGTCAAGTGAATGGTGCTGTTGATCTTTTGGAGGATATGCTCAACAAAGGGTTTGTTCCGGATTCTTTGACTTACACCACTTTATTGAACAGTTTGTGTAGGAAGAAGAAGCTCAGGGAGGCTTACAAGCTTCTCTGTAGGATGAAGGTCAAAGGGTGTAATCCTGATATTGTTCATTATAATACTGTTATATTGGGGTTCTGTAGGGAGGGGCGTGCTCACGATGCCTGCAAGGTTATTGCGGACATGCGGGCCAATGGGTGCTTGCCTAATCTGGTGTCCTATCGTACTTTGGCGAGGGGCTTGTGTGACATGGGAATGCTTGATGAGGCTCGCAAGTATGTCGAGGAGATGCTGTGCAAAGGTTTTTCTCCTCATTTTGCTGTTGTTCACGCCTTGGTGAAGGGGTTTTGTAATGTTGGTAGGGCTGAGGATGCCTGTGGAGTTCTTACTATGTCTCTTGAACATGGGGAAGCTCCTCATGTGGATACTTGGATGGTCTTAATGCCTGTAATATGTGAAGTTGATGATGGTGGGAAAATCAGTGGTGCTTTGGAGGAAGTTCTTAAGATTGAAATAAAAGGGCATACTAGAATTGTGGATGCTGGCATTGGTTTGGAGAACTACTTGATTAAGAAGATACGAGCCAACTCCAGAGTATTCTAA 1491 0.4655 MRHFIWEVLVTTVTRGMHYVYSFLLPSAIRSDEEEEAEMQRVFVQSKTLITVASNCIFFLPSLPLYLQNPKQQQAFHSNSGNTPFGSPTRVQKLIASQSDPLLAKEIFDVASRQPNFRHTYSTYLILILKLGRSKHFSFIDHLLRCLRSDSQPITPTLFTYLIRVYTEADLPDKALKTFYNILHFNCKPLPKHLNRILELLVSHRNYIRPAFLLFKDAHRYGVEPNTKSYNILMRAFCLNGNISIAYSLFNKMFKRDVVPDIESYRILMQALCRKSQVNGAVDLLEDMLNKGFVPDSLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIADMRANGCLPNLVSYRTLARGLCDMGMLDEARKYVEEMLCKGFSPHFAVVHALVKGFCNVGRAEDACGVLTMSLEHGEAPHVDTWMVLMPVICEVDDGGKISGALEEVLKIEIKGHTRIVDAGIGLENYLIKKIRANSRVF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03039 496 Gene3D Tetratricopeptide repeat domain 188 326 IPR011990 GO:0005515
Phco7g03039 496 NCBIfam pentatricopeptide repeat 229 262 IPR002885 -
Phco7g03039 496 NCBIfam pentatricopeptide repeat 334 366 IPR002885 -
Phco7g03039 496 NCBIfam pentatricopeptide repeat 264 297 IPR002885 -
Phco7g03039 496 NCBIfam pentatricopeptide repeat 299 332 IPR002885 -
Phco7g03039 496 NCBIfam pentatricopeptide repeat 368 400 IPR002885 -
Phco7g03039 496 Pfam PPR repeat family 260 309 IPR002885 -
Phco7g03039 496 Pfam PPR repeat family 330 379 IPR002885 -
Phco7g03039 496 PANTHER OS01G0228400 PROTEIN 208 473 - -
Phco7g03039 496 Gene3D Tetratricopeptide repeat domain 67 187 IPR011990 GO:0005515
Phco7g03039 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 366 400 IPR002885 -
Phco7g03039 496 Pfam PPR repeat 222 253 IPR002885 -
Phco7g03039 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 296 330 IPR002885 -
Phco7g03039 496 Pfam PPR repeat 159 184 IPR002885 -
Phco7g03039 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Phco7g03039 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
Phco7g03039 496 Gene3D Tetratricopeptide repeat domain 327 477 IPR011990 GO:0005515
Phco7g03039 496 SUPERFAMILY TPR-like 153 436 IPR011990 GO:0005515
Phco7g03039 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 331 365 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03039 Phco-Chr7 48976797 48978287 Dispersed