Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03027 ATGGGTGGCGACACCATAGACATGGACAAGGAGAGATTGACGGCGGAGATGAACTTCAAGGACTCATCTTCCGCCGTCATCAGAATCCGCCGCCGCCTTCCGGATTTCCTTCAGTCAGTGAAGATAAAGTACGTCAAGCTGGGCCTGGGATACGGTTACTCATGCAATGCAGCCAGCATTGTGATGCTAGCCATCACCCTTTCTCTCAGCTTCTCCCTCACCGGTCTCAAGCTCTCCAAACTCTGCTCCCACCAGCTCGACGCCGAGACCGTGGCGGCGGCTTCCGCGGCAATCCTTTCCCTCGCCGCTCTCTGCCGCTGGAAGCGCTCCGGTGCGGTGTATCTGGTGGACTTCGCGTGCTACAAGCCGGAGAAGGAGCGGAAAATCTCGGTGGAGTCGTTCCTGAAGATGACCGAAGAGAGCGGGGGTTTCGAGGAAGAGTCTCTTCAATTCCAGAGGAAGATTTCAACAAGAGCGGGTTTGGGCGACGAGACTTACCTACCCAGAGGAATCACTTCCCGGCCGCCCAAACTCTGCATGAGCGAGGCGCGCTTGGAGGCAGAAGAGGTGATGTTCGGGGCGTTGGACGCGCTTTTCGCGAAAACGGGCGTTGAGCCGAAGGACATTGACATCCTGGTGGTGAATTGTAGTTTGTTCAATCCTACCCCTTCTCTCTCCGCCATGATTGTGAACCACTACAAGCTGAGGAGCAACATCAAGAGCTACAACCTCGGCGGCATGGGATGCAGTGCGGGACTCATTTCCGTTGACCTCGCCAAGGACCTTCTCAAAGCCAACCCCAACTCCTACGCGCTGGTTCTCAGCACCGAGAACATAACCCTCAATTGGTACTTCGGCAACGACCGCTCCATGCTCCTCTGCAACTGCATTTTCCGAATGGGCGGCGCCGCCGTCCTCCTCTCTAGCAAGCCTTCCGATCGGTCCCGATCGAAGTACCAGCTGCTCCACACCGTCCGAACCCACAAGGGTGCCGACGACAAGAACTACAACTGTGTCTATCAGAAAGAGGACGATACCGGAAAAATAGGGGTGTGTTTGGCGAGGGAGTTAATGGCTGTGGCAGGGGATGCTCTGAAGACAAACATAACAACCTTGGGACCGATGGTTCTGCCTTACTCGGAGCAGTTGATGTTTTTCCTGTCACTGGTTCGGAGGAAGGTGTTGAAGATGTCGGGGGTGAAGCCGTACATTCCAGACTTCAAGCTGGCCTTCGAGCACTTCTGCATCCACGCCGGTGGAAGAGCGGTGTTGGACGAGTTGCAGAAGAATCTCCAGCTGAGCGAGTGGCACATGGAGCCCTCCAGAATGACGCTCCACCGCTTCGGCAACACCTCCAGCAGCTCCCTCTGGTACGAGCTTGCCTACACGGAGGCCAAGGGTCGGGTCGCGAAGGGGGACCGGGTCTGGCAGATCGCATTCGGGTCGGGTTTCAAGTGCAACAGCGCCGTCTGGAAGGCCGTTCGGGACATCCCGGAGTTAACTGAATGGCGTGGCAACCCCTGGGATGATTCCATCCACACCTATCCCCTTAATCTTCCCACCACCTCTTAA 1572 0.5655 MGGDTIDMDKERLTAEMNFKDSSSAVIRIRRRLPDFLQSVKIKYVKLGLGYGYSCNAASIVMLAITLSLSFSLTGLKLSKLCSHQLDAETVAAASAAILSLAALCRWKRSGAVYLVDFACYKPEKERKISVESFLKMTEESGGFEEESLQFQRKISTRAGLGDETYLPRGITSRPPKLCMSEARLEAEEVMFGALDALFAKTGVEPKDIDILVVNCSLFNPTPSLSAMIVNHYKLRSNIKSYNLGGMGCSAGLISVDLAKDLLKANPNSYALVLSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSSKPSDRSRSKYQLLHTVRTHKGADDKNYNCVYQKEDDTGKIGVCLARELMAVAGDALKTNITTLGPMVLPYSEQLMFFLSLVRRKVLKMSGVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSEWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVAKGDRVWQIAFGSGFKCNSAVWKAVRDIPELTEWRGNPWDDSIHTYPLNLPTTS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03027 523 PANTHER 3-KETOACYL-COA SYNTHASE 94 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g03027 523 Pfam FAE1/Type III polyketide synthase-like protein 108 394 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phco7g03027 523 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 412 492 IPR013747 -
Phco7g03027 523 FunFam 3-ketoacyl-CoA synthase 123 493 - -
Phco7g03027 523 PIRSF Very_long_ch_3-ktacl-CoA_syn 35 523 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g03027 523 Gene3D - 112 494 IPR016039 GO:0016746
Phco7g03027 523 CDD CHS_like 114 491 - -
Phco7g03027 523 SUPERFAMILY Thiolase-like 298 494 IPR016039 GO:0016746
Phco7g03027 523 SUPERFAMILY Thiolase-like 105 316 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03027 Phco-Chr7 48906633 48908204 Dispersed/Transposed