Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03026 ATGAGTGTGAAGGTAGCAAAAGATGGCATGGTGGTTGGGAAATACGAGTTGGGAAAAACCATCGGAGAGGGAAGCTTTGCGAAGGTGAAGTTGGCCAGAAACGTCAACACCGGCAACAACGTCGCCATCAAAATCCTGGACCGTAAACATGTCCTCCGCCACAACATGATGGAACAGCTCCAGCGAGAAATATCAACCATGAAACTCATCAATCACCCAAACGTTACTAAAATATTTGAGGTGATGGCTAGCAAAACAAAGATTTACATTGTTCTGGAGTTACTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGGAGACTTAAAGAAGATGAAGCTAGAAATTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATCTGAAGCCTGAGAATCTTCTTCTGGACTCGAATAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACTCGCAGAACGAGGATGAACTGCTCCACACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTGATTCATAACAGAGGCTATGTTGGTTCTACATCTGACATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTTCTTGCCCTTTGAGGGGCCAACTCATATGGCTCTGTTCAGGAAAATTGTGAAGGCAGAATTTTCTTGTCCATCATGGTTTCCACCACAGGCAAAGACACTGCTGAAACGCATTCTAGACCCAAACCCTCTAACGAGGATAAAAATTCCTGAGCTCTTAAAAGACGAGTGGTTCAAGAAAGGATACAAACCAACATATTTCGCTGAGGAAGAGGACCTAAGTTTAGATGATGTAGCCGTCGCTTTCAACGAGTCTAATAAAAATCTAGTGACAGAAAGGAGAGTGAAACCTGTCTACATTAATGCTTTTGAGCTCATTTCTAGGTCACTAAGTTTCAATCTTGACAACTTGCTCGAGATGCAAACGGATGAAATACAGCAAGAAACCTGTTTTACTTCACAGTGCCCTGCAAATGAAATTATGTACAAAATCGAGGAAGCAGCCAAGCCACTGGGATTTATTGTACAAAAGAAAAATTATAAGATGAAGCTGCAAGGTGACCACAACGGGAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTTGAAGTCGCTCCCTCAGTGCACATGGTGGAGCTGCGAAAGACAGGGGGTGATACACTAGAGTTTCATAAGTTCTTCAAAATTTTCTCATCAGGGTTGCAAGACATTGTGTGGCATACTGAAGGAAAAAAATGA 1308 0.4266 MSVKVAKDGMVVGKYELGKTIGEGSFAKVKLARNVNTGNNVAIKILDRKHVLRHNMMEQLQREISTMKLINHPNVTKIFEVMASKTKIYIVLELLDGGELFDKIAAKGRLKEDEARNYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYSQNEDELLHTACGTPNYVAPEVIHNRGYVGSTSDIWSCGVILFVLMAGFLPFEGPTHMALFRKIVKAEFSCPSWFPPQAKTLLKRILDPNPLTRIKIPELLKDEWFKKGYKPTYFAEEEDLSLDDVAVAFNESNKNLVTERRVKPVYINAFELISRSLSFNLDNLLEMQTDEIQQETCFTSQCPANEIMYKIEEAAKPLGFIVQKKNYKMKLQGDHNGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFFKIFSSGLQDIVWHTEGKK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03026 435 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phco7g03026 435 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g03026 435 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
Phco7g03026 435 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Phco7g03026 435 Gene3D Kinase associated domain 1, KA1 305 430 - -
Phco7g03026 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 415 - -
Phco7g03026 435 Pfam NAF domain 307 367 IPR004041 GO:0007165
Phco7g03026 435 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g03026 435 CDD CIPK_C 311 418 - -
Phco7g03026 435 FunFam Non-specific serine/threonine protein kinase 8 307 - -
Phco7g03026 435 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Phco7g03026 435 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
Phco7g03026 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Phco7g03026 435 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Phco7g03026 435 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Phco7g03026 435 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03026 Phco-Chr7 48896515 48901376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco7g03026 Pkinase 3.6e-72 CL0016