Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02993 ATGTCGGAAGGAACCAGTTTAGCCCTGGAATCATCTGAAAATGGCACGGATTTGTCTCAGGATGACATTGACACCATTGAGGAAACAGCAGAGGAAACAATATTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGATTTGTATCTCAAGAAGCAGCTTATGAATTTTATTGCAGTTTTGCCAAACAGTGTGGCTTTTCAATTAGACGACACCGAACTCGAGGGAAAGATGGAGTTGGAAGGGGAGTTACAAGGAGGGACTTCACTTGCCATCGTGGTGGTTTTCCCCAGATTAAACCTTCTGATGATGGAAAGGTGCAAAGGAACCGCAAATCATCTCGCTGTGGTTGCCAAGCATACATGCGTATTGTGAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGTTTTAGGAACATACACAATCATGAGTTACTAAAATCCAATGAGGTGCGCCTTCTTCCAGCATATTGTCCGATATCTCCTGATGACAAGAGTCGTATATGCTTGTTTGCTAAAGCTGGAATGTCAGTAAGGCAGATGTTAAGACTGATGGAGCTTGAGAAAGGTGTCAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTAAGAAACCTGCTGCAGTCTTTCAGAAATGTGGACAGAGATAATGATGCCATTGATTTGATTGCCATGTGCAAGAGGTTAAAGGATGAAAACAACAACTTCAAATATGAATTCAAAATAGATAGTAATAACAGGCTTGAACATATTGCGTGGTCCTATAGTTCATCCATTCAATCATATGAGGCATTTGGCGATGCTGTAGTTTTTGATACCACCTACCGAGTAGATGCTTATGACATGCTGTTGGGATTTTGGCTTGGTGTGGACAATAATGGCATGACTTGTTTCTTTAGTTGCGCACTTCTACGGGATGAAAACATATTGTCTTTCTCATGGGCTCTAAAGGCTTTCTTGGGGTTCATGAAAGGAAAGGCTCCACAAACAATATTGACAGATCACAACACTTGGCTGAAAGAAGCTATTGCAGTTGAATTGCCTGAAACTAAACATGCCTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGATTGGTTTTCTTTACTTCTTGGATCACAATATGATGAGTGGAAAGCTGAGTTCCACCGGCTCTACAATTTGGAACTGGTGGAAGATTTTGAAGAAGGCTGGCGGCAAATGGTTGACAAATATGGACTCCACACAAATAAACATATTATTAGCCTGTATTCATTGAGGACATTTTGGGCTTTACCATTCTTGAGGCGCTACTTCTTTGCAGGATTGACCAGTACATGTCAGTCTGAGTCCATTAATGGTTTCATCCAACGTTTCTTGAGTGCCCAATCTCAACTAGACCGCTTTGTGGAGCAAGTGGCTGATATTGTTGATTTTAATGACCGAGCTGGAGTGAAACAAAAGATGCAAAGGAAACTGCAGAAAGCTTGCCTCAAAACCGGTTCACCTATTGAATCCCATGCTGCCACTGTACTTACTCCTTATGCCTTAAATAAACTTCAGGAAGAGCTAGTTTTGGCGCCCCAATATGCATCCTTCCTGGTTGATGAAGGTTGTTTCCAGGTCAGACACCATTCTCAGTCAGACGGAGGGTGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATCAGCTGCAGCTGCCATCTGTTCGAGTTTTCAGGCATCTTATGTAGACATGTGCTACGTATCCTGTCAACTAATAACTGTTTTCACGTCCCTGATCAATATTTACCCGGCCGATGGCGAGGCATTAGTTCATCTTCTGTTAACCACTTCCGGGGTACCACTAGTAGGGATCAGCCTGAAAGGATGCAACTTTTGGAATCCATGGTTTCAACATTTTTAGTGGAATCCATTGAAACTGAGGAACGTCTGGATGTTGCTTGCGAGCAAATTTCCATGGTGCTATCACGCATCAAAACTCTTCCTAGGTCTCCACATGGGGTGAATGACATTGCATTTAGTTATCCATCAGATTCATTAATCCTCCCAGAGGTAGAAGATACTGATGGAATGATTCCCGGCTTTACAATCACAAATCCCCATGATTCTATCACTACAGGAAAGCTCAAGGAAAGAAGGGCTAGAGATGGAGTCGATCTCACAAGGAAGCGCCGACAGTTTTCTGCACCATTGTGTGCTCAATATGGACATGATGCATCTGATTGCTCAATAATGGCGACTGACAATATGAGTGGAGATGCATTAGGGTACTTGTAG 2277 0.4229 MSEGTSLALESSENGTDLSQDDIDTIEETAEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGFPQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFRNIHNHELLKSNEVRLLPAYCPISPDDKSRICLFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENNNFKYEFKIDSNNRLEHIAWSYSSSIQSYEAFGDAVVFDTTYRVDAYDMLLGFWLGVDNNGMTCFFSCALLRDENILSFSWALKAFLGFMKGKAPQTILTDHNTWLKEAIAVELPETKHAFCIWHILSKFSDWFSLLLGSQYDEWKAEFHRLYNLELVEDFEEGWRQMVDKYGLHTNKHIISLYSLRTFWALPFLRRYFFAGLTSTCQSESINGFIQRFLSAQSQLDRFVEQVADIVDFNDRAGVKQKMQRKLQKACLKTGSPIESHAATVLTPYALNKLQEELVLAPQYASFLVDEGCFQVRHHSQSDGGCKVFWVPCQEHISCSCHLFEFSGILCRHVLRILSTNNCFHVPDQYLPGRWRGISSSSVNHFRGTTSRDQPERMQLLESMVSTFLVESIETEERLDVACEQISMVLSRIKTLPRSPHGVNDIAFSYPSDSLILPEVEDTDGMIPGFTITNPHDSITTGKLKERRARDGVDLTRKRRQFSAPLCAQYGHDASDCSIMATDNMSGDALGYL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02993 758 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g02993 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Phco7g02993 758 SMART 26again6 562 589 IPR006564 GO:0008270
Phco7g02993 758 Pfam MULE transposase domain 275 367 IPR018289 -
Phco7g02993 758 Pfam SWIM zinc finger 559 584 IPR007527 GO:0008270
Phco7g02993 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Phco7g02993 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 606 IPR031052 GO:0006355
Phco7g02993 758 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02993 Phco-Chr7 48617311 48620236 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco7g02993 MULE 1e-20 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02993 7 48617311 48620236 Phco7g02993 7 48617311 48620236 ECH