Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02916 ATGTTTCAATCCCAACGCTTCAAACCCGTTCTTCTCTATCTCAACTCACTCACAATAACACCTCTTCAAACCCCAAAACCCAAGAATCCTTTTCCCTCAATACTCTCTCTGAAACACACCTCAAATGCTTCACAGCAACACCCTTTCACGGTTTCCTACCTCGTAAACGATTGCGGGTTCTCCCCAGAAACCGCTCTCAAGGCCTCCAAATTCATTCAATTCGAAACCCCCGAAAAGCCCGACTCAGTCATCGCCTTCTTCAGAGACAACGGATTCAGCAACACCCAGATAAACAGCATCGTTAGAAGAGCACCCAATGTGCTAACTTGCGACCCCCACAAAAGGATTTTTCCAAAGTTCGAGTTTTTACTCTCCAAAGGGGCCTCACGCTCTGACATTGTGGAACTGGTAAGTAGGAGCCCCAGAATCCTTTATTCGAGCCTCGAGAATAACATTGTCCCTTCCTATGAACTGATGAGGAAGTTTCTTCAAACTGACGAGAAAACCATGGATTGCATACGCTCTTGTGGTCATTTCTTTGGTACTGATCGTGTGGTGCACAATGTGAAACTTTTAGTTGATTATGGAGTCACTGATCCTGTAATAGCCTTTTTGTTACGCAGGAGAGTTTCTATAATCTTGTGTTCTGCCTTGAAGAGGACTTTGGATGAGGTTAAGGAAATGGGGTTTGACCCTACCAAGTTGAGCTTTGCCATCGCGCTGCTGGCGAAAAAGACCATTCCGAAATTGCGATGGGAGAGGAAAGTTGAAGCCTTTAAGAGATGGGGTTGGTCTGAAGAATTGGTTCTTAGTGTGTTTAAGAGGCAGCCCCTCGTAATGTTGGTGTCCCAAGATAAGATTGATAGGATTATGAGATTTTGGGTCAAGCAATCAGGTTGGGACTATTTGGCTCTTACCAGGAAGCCAGAGATTTTTGGATTTAGTTTGGAGAGAAGGATCATTCCAAGGGCACTTGTTGTCCAGTATTTACTCAGGAAAGGTTTGAGGGGAAAGAGTGCCAGCTTGCTTACGCCATTTTCTGTTTCTGAAAAGGAGTTTATTGAAAAGTATGTCATGCGTTTTAAGGAGGAGACAAGTGAACTATTAAAGCTGTACCAAATGAGTGTTCAAGGACTAAAAGAGGATGATAAAATGGTTAACTCATGA 1167 0.437 MFQSQRFKPVLLYLNSLTITPLQTPKPKNPFPSILSLKHTSNASQQHPFTVSYLVNDCGFSPETALKASKFIQFETPEKPDSVIAFFRDNGFSNTQINSIVRRAPNVLTCDPHKRIFPKFEFLLSKGASRSDIVELVSRSPRILYSSLENNIVPSYELMRKFLQTDEKTMDCIRSCGHFFGTDRVVHNVKLLVDYGVTDPVIAFLLRRRVSIILCSALKRTLDEVKEMGFDPTKLSFAIALLAKKTIPKLRWERKVEAFKRWGWSEELVLSVFKRQPLVMLVSQDKIDRIMRFWVKQSGWDYLALTRKPEIFGFSLERRIIPRALVVQYLLRKGLRGKSASLLTPFSVSEKEFIEKYVMRFKEETSELLKLYQMSVQGLKEDDKMVNS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02916 388 Gene3D Transcription termination factor 3, mitochondrial 165 371 IPR038538 -
Phco7g02916 388 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 FunFam Mitochondrial transcription termination factor-like 148 365 - -
Phco7g02916 388 Pfam mTERF 253 353 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 Pfam mTERF 85 287 IPR003690 GO:0003690|GO:0006355
Phco7g02916 388 PANTHER CGI-12 PROTEIN-RELATED 46 362 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02916 Phco-Chr7 48117454 48118620 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco7g02916 mTERF 1.5e-26 No_clan