Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02915 ATGTTTGGCTCCCAAAGCTTCAAATCCCTTTTTCTCTATTCGAAGAGAATCACAACCCCCAAACCCTATATTCCTTTCCCCTCCACACTCTCTCTGAAACACTTCTCCCTCACTCCTCAACAACACTCACTCACAGTTTCCTACCTCGTAAACACCTTTGGCTTCTCACCTCAAACCGCTCTCAAGGTTTCCGAGAGCGTTAGCTTCGATACCCCTCAAAAGCCCGACTCAGTCATCGCTTTCTTTACCAAAAATGGATTCACCGATGCCCATATCAATAACATTGTCAAAAGGGTACCCAACATACTCGTTTGCAACGCCGACAAGAGACTTTCGCCAAAGTTCCAATTTTTACTCTCAAAGGGTGCTTCAGCTTCTGATATCGTTCGCCTCGTTAATAAGTGCCCCAGAATCCTCGGATCCAGCCTCAAGAACAACGTGATCCCCTCCTTCGAATTGGTGAAAAGGTTCCTCCAATCTGACAAGAAAACCTTTGACTGTGTTTTCGGAAGTAGGCCTTTCCTTCAATATAACGTTGGAGTGCAGAATGTGAACATGTTGCTCGATGCTGGAGTCCTTGACTCCAGCATCGGCTATTTGTTTGGAAGGAGGCCTTCTATACTCTTGTCTACTAACTTGAGGGAGGCAATTGATGAAGTTAAGGAAATGGGGTTCGACCCTTCCAAGATAACTTTCGCGATTGCTTTGCATGCCAAAAGGGTTGTGTCGAAATCGCGGTGGGACGCGAAAGTTGATGCCTTTAAGATGTGGGGTTGGTCGGAGGAAATGGTTCTTGATTCGTTCAGGAAGCATCCCCTCTTAATGTTGGCGTCCAAGGATAAAATTAATGAGGTCATCAGATTTTGGGCTGTTGAATTAGGTTGGGACCCTTTGGCACTTGCCAAAATGCCGAAGATTTTTGGATTCAGTTTGGAGAGAAGGATTGTTCCGAGGGGTTTGGTTGTCCGGCATTTGATCGTCAAGGGTTTGAGAGAGAAGAGTGCCAAGTTGTCTACCCCGTTTGATGTTTCTGAAGAGGTGTTTCTTAAAAATTATGTGATGCGTTTTAAGGAGGAAGTGTGTCAACTGTTAAAGCTTTATCAGGAAAAAGTAAGTTTCCAAGAAAACAGGGAGGATTATGTAGAATCTGCCAGTTAG 1158 0.4482 MFGSQSFKSLFLYSKRITTPKPYIPFPSTLSLKHFSLTPQQHSLTVSYLVNTFGFSPQTALKVSESVSFDTPQKPDSVIAFFTKNGFTDAHINNIVKRVPNILVCNADKRLSPKFQFLLSKGASASDIVRLVNKCPRILGSSLKNNVIPSFELVKRFLQSDKKTFDCVFGSRPFLQYNVGVQNVNMLLDAGVLDSSIGYLFGRRPSILLSTNLREAIDEVKEMGFDPSKITFAIALHAKRVVSKSRWDAKVDAFKMWGWSEEMVLDSFRKHPLLMLASKDKINEVIRFWAVELGWDPLALAKMPKIFGFSLERRIVPRGLVVRHLIVKGLREKSAKLSTPFDVSEEVFLKNYVMRFKEEVCQLLKLYQEKVSFQENREDYVESAS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02915 385 Pfam mTERF 182 348 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 Pfam mTERF 80 174 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 FunFam Mitochondrial transcription termination factor-like 143 360 - -
Phco7g02915 385 Gene3D Transcription termination factor 3, mitochondrial 168 366 IPR038538 -
Phco7g02915 385 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 SMART mt_12 198 226 IPR003690 GO:0003690|GO:0006355
Phco7g02915 385 PANTHER CGI-12 PROTEIN-RELATED 41 357 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02915 Phco-Chr7 48112186 48113343 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco7g02915 mTERF 5.4e-16 No_clan