Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02898 ATGCCTTCTCCATCTCGTTATGGAATTTCGATTACCCAAAATGCCCTTTCACTCATTTTCTTATTTTACCTCCTAACGGCCCCACCTCCCTCCACGGCTCTCAACTTCACCGCGCTGCTCTCCACCGTGCCGGACCTCTCCCAATTCACGGCACTCCTCGCCTCCGCAACGCCTCTCCTGGCGGATCTCTCCGACCGCTCCTCCCTCTCCATCCTCGCCGTCCCCAACGCCTATCTCGCCGCCGACGACCACCTCGCCCGCCACCACCTCTCCCCCGCCGCCCTCGCTGATGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTATCCTGGTCAGACCTCCGCGCCCTCCCCCCCGCCGGGAAACTCGTCACCACGCTCCTCCAAACAACCGGACGCGCCACCGACAACTTCGGCTCCGTGAACCTCACGCGCGACCCCCAATCCGGCCTCGTCTCGATCCGCTCCCCCGCCCCCTATTCCCCCTCGAACGTCACCGTTTTGTCCCTCGTCAAAACCCTACCCTACAACGTCACCATCTTCGCTGTCAATTCCCTCCTCATCCCCTACGGCCTTGACCTCATGGCATCCGAAACCCGCCCCAACATCGTTCTCAACATCACCAAAGCCCTAATCGACGGCCACAACTTCAACGTCGCCGCCTCGATGCTTGCGGCCTCCGGCGTAGTTCAGGAATTTGAGGCTGATGAGGGTGGTGCTGGAATCACTCTTTTCGTACCTGTGGATGATGCCTTTGCCGATCTTCCACCCTCTGTTGCCCTTCAGTCTCTACCTGCAGATAAAAAAGGGGTGGTTCTTAAATTCCATGTTCTTCATTCCTATTACCCTCTTGGCTCGCTTGAATCAGTTGTTAACCCCTTCCAACCCACCCTCGCTACTGAGGCCATGGGTGCTGGTAGCTTCACGCTCAACATTTCGCGTGTGAATGGCTCTGTTGCCATCAACACCGGCATTGTGCAGGCCTCAGTTACGCAGACCGTCTTTGATCAGAACCCTGTTGCCATTTTTGGGGTTTCCAAGGTTCTCTTGCCGAGGGAGATTTTTGGCAGGAATCCAATTGTCACCGCCAAGCCTCTTGAAGGTGCTCCTCCGCCGGATGATGATGCGCTGTCACCTGAGAATTCGCCGGGATTTGGTGGACAGCCCTCGCACCTATCGTCACCGCCGGGGTTTCGCGAAGATGTGCGGTCTCATGGTGGTGGTGGTGGTTCCTTGTCCTTTGTTGTTTTTCTTTGCTGTATAGGATTGTATCTTGTGGTATAG 1281 0.5699 MPSPSRYGISITQNALSLIFLFYLLTAPPPSTALNFTALLSTVPDLSQFTALLASATPLLADLSDRSSLSILAVPNAYLAADDHLARHHLSPAALADVLRYHVLLQFLSWSDLRALPPAGKLVTTLLQTTGRATDNFGSVNLTRDPQSGLVSIRSPAPYSPSNVTVLSLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPNIVLNITKALIDGHNFNVAASMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKGVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGRNPIVTAKPLEGAPPPDDDALSPENSPGFGGQPSHLSSPPGFREDVRSHGGGGGSLSFVVFLCCIGLYLVV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02898 426 MobiDBLite consensus disorder prediction 361 402 - -
Phco7g02898 426 Gene3D FAS1 domain 204 351 IPR036378 -
Phco7g02898 426 ProSiteProfiles FAS1/BIgH3 domain profile. 33 186 IPR000782 -
Phco7g02898 426 FunFam Fasciclin-like arabinogalactan protein 4 204 351 - -
Phco7g02898 426 FunFam fasciclin-like arabinogalactan protein 4 33 188 - -
Phco7g02898 426 Pfam Fasciclin domain 215 350 IPR000782 -
Phco7g02898 426 Gene3D FAS1 domain 26 188 IPR036378 -
Phco7g02898 426 SUPERFAMILY FAS1 domain 210 350 IPR036378 -
Phco7g02898 426 ProSiteProfiles FAS1/BIgH3 domain profile. 203 348 IPR000782 -
Phco7g02898 426 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 404 IPR033254 -
Phco7g02898 426 SUPERFAMILY FAS1 domain 31 189 IPR036378 -
Phco7g02898 426 SMART fasc_3 242 351 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02898 Phco-Chr7 47951795 47953219 Transposed