Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g02886 | ATGATCCATGCTATGCCCAAGTGCTCCACAATAAACCTTCTCAAACATTCTCTTCCAACAACACCCCATCGCTACATCTCCCAAACCCTAGCATTTCCCTCTCACTCTTCCTCTCCCCATGCCCCTCAACCTCACCCTTCGGCTGAAATCTTCAAATCCGGTACCAAAATGGGTTCTTACAAATTGGGTGATTTGTCTTTCTATTCCCTCATTCAGAACCACGCCTCTACCCTCGATTTTGGGTCCCTAGAAGAAGTCCTTCAGCAAATGAAGCGCGAAAGGAGGGTTTTTCTAGAGAAGAATTTCATTGTTATGTTCAAAGCTTATGGGAAGGCTCATTTGCCTGAGAAAGCTGTGGACTTGTTCCTCAGAATGGGGGGTGAGTTTCAGTGTAAACAAACTGTGAAATCATTCAATTCGGTTCTTAGTGTTGTTATTCAAGAGGGTCTTTTCAATCGTGCCTTGGAGTTGTACTCACATGTTGTTGCATCCAGGAGTTTTAACATACACCCAAATGCACTCACTTTTAACTTGGTCATTAAGGCCATGTGTAGGCTTGGTTTGGTTGATCAAGCAGTTGAGGTTTTTAGAGAGATTCCACTAAGGAATTGTGCTCCCGATGCTTACACGTATTCTACCTTGATGCATGGGTTGTGTCAGGAGGGTAGAATCGACGAGGCGGTTTCGTTGTTGGATGAAATGCAAGTTGAAGGCACCTTCCCTAACCCGGTTGCGTTTAATGTGTTGATCAGTGCGTTGTGCAAGAATGGTGACTTGGCACGTGCAGCCAAGCTTGTTGATAATATGTTTCTTAAGGGTTGTGTCCCGAATGAAGTGACCTATAATGCACTTGTTCATGGCTTGTGCCTCAAGGGAAAGTTGGAGAAGGCGGTGAGTTTGTTGAATAGGATGGTGTTGAATAAGTGTGTACCTAATGATGTTACTTTTGGAACACTTATTAATGGGTTTGTTAAGCAAGGTAGAGCCTCCGAAGGGGCTCGAGTTTTGGTCTCCTTGGAAGAGAGGGGCCATTGTGGGAACGAGTATGTGTACTCGTCCCTTATCAGTGGCCTGTGCAAGGAGGGAAAATTCAACCATGCAATGCAGTTGTGGAAGGAAATGGTTGGAAAGGGATGTAAACCAAATACTGTTGTTTATAGTGCTCTTATCGATGGGCTTTGCCGAGAAGGGAAGTTAGATGAAGCAAGGGAGGTCTTATCTGAAATGAAGAGTAAAGGTTACTTGCCCAATTCTTTCACTTACAGTTCCCTAATGAGGGGTTATTTTGAAGCAGGCATTAGCCATAAAGCTATTCTTGTTTGGAAAGAGATGGCAAACAATAATTGTAATCATAATGAGGTTTGTTACAGTATACTCATTAATGGCTTGTGCAAGGATGGGAAGGTTATGGAGGCTTTAATGGTGTGGAAGCAAATGCTGAGTAGAGGAATTAAATTAGATGTTGTGGCTTACAGTTCAATGATTCATGGCTTCTGTAATGCTAACTTAATAGAACAGGGCCTGAAACTTTTCAATCAGATGCTTTGTCAGGAGCCGGAGGTACAGCCGGATGTGATAACGTATAACATAATTTTAAATGCATTGTGCATGCACAATAGCATCTCTCGAGCCATTGATATTGTAAATATTATGCTAGATCAAGGTTGTGATCCTGATTTTATTACGTGCGACGTTTTCTTGAAGACTTTAAGAGAAAATGTGAATCCACCTCAAGATGGTAGGGTGTTTCTAGATGAACTTGTAGTAAGGTTACTTAAGCGACAGAGAACAATAGGTGCTTCCAAAATTATCGAAGTGATGCTGAATAAATTTTTGCTGCCAAAAGCTTCTACTTGGGCAATGATTGTTCAACAGCTCTGCAAACCCAAAAAGGTTCGAAAAGTCATCAGTGAATGTTGGAGCAAGCTAAGTGGCTGA | 1938 | 0.4231 | MIHAMPKCSTINLLKHSLPTTPHRYISQTLAFPSHSSSPHAPQPHPSAEIFKSGTKMGSYKLGDLSFYSLIQNHASTLDFGSLEEVLQQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFLRMGGEFQCKQTVKSFNSVLSVVIQEGLFNRALELYSHVVASRSFNIHPNALTFNLVIKAMCRLGLVDQAVEVFREIPLRNCAPDAYTYSTLMHGLCQEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKNGDLARAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNRMVLNKCVPNDVTFGTLINGFVKQGRASEGARVLVSLEERGHCGNEYVYSSLISGLCKEGKFNHAMQLWKEMVGKGCKPNTVVYSALIDGLCREGKLDEAREVLSEMKSKGYLPNSFTYSSLMRGYFEAGISHKAILVWKEMANNNCNHNEVCYSILINGLCKDGKVMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLIEQGLKLFNQMLCQEPEVQPDVITYNIILNALCMHNSISRAIDIVNIMLDQGCDPDFITCDVFLKTLRENVNPPQDGRVFLDELVVRLLKRQRTIGASKIIEVMLNKFLLPKASTWAMIVQQLCKPKKVRKVISECWSKLSG | 645 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g02886 | 645 | Gene3D | Tetratricopeptide repeat domain | 223 | 334 | IPR011990 | GO:0005515 | |
| Phco7g02886 | 645 | Gene3D | Tetratricopeptide repeat domain | 519 | 644 | IPR011990 | GO:0005515 | |
| Phco7g02886 | 645 | Gene3D | Tetratricopeptide repeat domain | 69 | 222 | IPR011990 | GO:0005515 | |
| Phco7g02886 | 645 | Gene3D | Tetratricopeptide repeat domain | 335 | 444 | IPR011990 | GO:0005515 | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 347 | 381 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 312 | 346 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 277 | 311 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 382 | 416 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 207 | 241 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 487 | 521 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat | 342 | 375 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat | 238 | 269 | IPR002885 | - | |
| Phco7g02886 | 645 | PANTHER | OS03G0856100 PROTEIN | 168 | 464 | - | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 175 | 208 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 279 | 312 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 454 | 488 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 209 | 242 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 526 | 559 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 489 | 516 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 244 | 278 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 419 | 452 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 314 | 347 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 349 | 383 | IPR002885 | - | |
| Phco7g02886 | 645 | NCBIfam | pentatricopeptide repeat | 384 | 417 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat | 104 | 125 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 417 | 451 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat family | 171 | 220 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat family | 276 | 325 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat family | 452 | 500 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat family | 381 | 428 | IPR002885 | - | |
| Phco7g02886 | 645 | Pfam | PPR repeat family | 523 | 570 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 242 | 276 | IPR002885 | - | |
| Phco7g02886 | 645 | Gene3D | Tetratricopeptide repeat domain | 445 | 518 | IPR011990 | GO:0005515 | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 452 | 486 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 172 | 206 | IPR002885 | - | |
| Phco7g02886 | 645 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 524 | 558 | IPR002885 | - |