Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02875 ATGGCCTCAAACTCCATGGCTGGCTTCATCACTGGCTCTCATGCTCATTTCTCACCTGACTCCGATGAGCATCAGGCCCCTACTCGTCAACCTTCATCAAAAACATGTCGTGTCTGTGGTGATGAGATTGGATATAAGGAAAATGGAGAAGTGTTTGTGGCTTGTCATGTGTGTGGATTTCCCGTGTGTCGACCATGTTATGAGTATGAGAGGAGTGAAGGGAACCAGAGCTGTCCTCAATGCAACACTCGCTATAAGCGCCACAAAGGTTGTCCTAGAGTGGTTGGAGATGAAGAAGAGAACTTGGATGCTGATGATTTCGATGATGAGTTTTCAATTAAGAATCACCGCGAAGATCTAGATCGGCAACATGATATTAATCATGTGGGAAATGGGGATTATAATCAAGAGAAATTGCATCCCAATGGTCAAGCTTTCTCTTCAGCTGGGAGTGTTGCAGGAAAGGATTTTGATGGGGAGAAAGATTTCTACAGCAATGCAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAAAGAGGTCTTCTGAACAAAGAAGACGGAAAAGAAGACCAAGGTGAAGATGATGATTACATTTTGGCTGAAGCTAGACAACCATTGTGGCGCAAGGTTCCAATATCTTCAAGCTTAATCAATCCATATCGCATAGTGATTGTGATGAGGCTGGTCATCCTTGCTTTCTTCTTTAGATTCCGAATCTTAACTCCAGCAAATGATGCATATGCCTTGTGGCTAATCTCTGTTATATGTGAGATATGGTTTGCATTGTCATGGATTCTTGATCAGTTCCCCAAGTGGTTCCCCATCACACGTGAGACTTACTTGGACCGCTTGTCCTTGAGGTTTGAGCGTGAAGGAGAACCTAACCAACTAGCTCCAGTTGATTTCTTTGTGAGTACTGTGGACCCTTTGAAGGAACCTCCCATTATAACAGCCAACACTGTCCTTTCCATCCTCGCTGTTGACTATCCTGTTGACAAGGTCAGCTGCTATGTCTCTGATGATGGTGCATCTATGCTTCTGTTTGATTCCTTGGCAGAAACTGCTGAGTTTGCAAGAAGATGGGTTCCCTTTTGCAAGAAGTATAACATAGAGCCAAGGGCTCCTGAGTTTTACTTCTCTCAGAAAATTGATTACTTAAAAGATAAGGTGCAACCTACATTTGTGAAGGAAAGAAGGTCCATGAAGAGAGAATATGAAGAGTTTAAGGTGAAAATTAATTCTTTGGTGGCAAAGGCTCAAAAGAAACCTGAGGAAGGGTGGGTGATGCAGGATGGAACTCCATGGCCTGGGAACAACACTCGTGATCATCCAGGAATGATTCAGGTATATTTAGGAAGTGCTGGTGCACTAGATGTAGAAGGCAAGGAATTGCCACGACTTGTGTATATTTCACGTGAAAAACGACCTGGATATCCTCACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACCAATGCACCATTCATGTTGAATTTGGATTGTGATCACTACGTCAATAATTGCAAGGCAGTAAGAGAGGCTATGTGCTTTTTAATGGACCCCAACCTTGGGAAGAAGTTGTGCTATGTTCAATTTCCACAAAGATTTGATGGTATTGATCGCCATGATAGATATGCTAATCGCAACACTGTGTTCTTTGATATCAATATGAAAGGGCTTGACGGGATTCAAGGTCCAGTATATGTTGGTACTGGAACTGTGTTCAACAGGCAGGCATTGTATGGTTACGATCCACCAGTGTCGGAGAAAAGACCAAAGATGACATGTGACTGTTGGCCATCATGGTGTTGCTTTTGTTGTGGTGGTTCAAGAAAGTCCAAGTCAAAAAAGAAATCTGGAAAAGGTCTCTTTAGTGTATTCTCCAAGAACAAGAGCAAAAAGAAAATGATGGGGAAAGACTATGTTAGAAAAGGATCGGGGTCCATGTTTGATCTTGAAGAGATTGAAGAAGGGCTTGAAGGGTATGAGGACTTGGAGAAATCATCCCTCATGTCCCAGAAAAGTTTTGAGAAACGATTCGGGCAATCACCTGTTTTCATTGCTTCCACCTTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATAGCAATTCATTGGTCAAGGAGGCCATTCATGTTATAAGTTGTGGCTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGCTCAGTCACAGAAGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGAGCAGCTTTCAAGGGATCTGCCCCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGTCGCCACTGCCCCTTGTGGTATGGTTATGGAGGAAAACTTAAGTACCTAGAGAGACTAGCTTACACTAACACCATTGTTTATCCATTCACCTCCATCCCTCTGCTTGCGTACTGCACAATTCCTGCTGTGTGTCTTTTGACTGGAAAGTTCATCATCCCCACACTGACCAACCTTGCTAGCGTTTGGTTTATGGCTCTTTTTATCTCCATCATTTTAACAAGTGTGCTTGAGCTCCGATGGAGTGGTGTTACAATAGAAGCCCTGTGGCGAAATGAGCAATTTTGGGTCATTGGAGGTGTTTCTGCTCACCTTTTTGCTGTGTTTCAAGGTCTCCTCAAAGTTCTTGCTGGAGTAGACACGAATTTCACAGTGACATCAAAAGCAGCAGAAGATGCTGAATTTGGAGAGCTCTATCTCTTTAAGTGGACCACTCTTCTCATCCCTCCAACAACTCTTATAATCTTGAATATTGTTGGTGTTGTGGCTGGAGTCTCTGGTGCTATAAACAATGGATATGGTTCATGGGGACCTTTATTTGGGAAGTTGTTCTTTGCCTTTTGGGTCATTGTTCACTTGTACCCTTTCCTCAAAGGTCTCATGGGAAAGCAAAACAGGACTCCTACCATTGTGGTCTTGTGGTCAATCCTTCTAGCATCTATTTTCTCATTGATTTGGGTCAGGATTGATCCCTTCTTGCCCAAGCAAACCGGTCCAGTGCTAAAACAATGTGGGGTGGAATGCTAA 3147 0.4306 MASNSMAGFITGSHAHFSPDSDEHQAPTRQPSSKTCRVCGDEIGYKENGEVFVACHVCGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRVVGDEEENLDADDFDDEFSIKNHREDLDRQHDINHVGNGDYNQEKLHPNGQAFSSAGSVAGKDFDGEKDFYSNAEWQERVEKWKVRQEKRGLLNKEDGKEDQGEDDDYILAEARQPLWRKVPISSSLINPYRIVIVMRLVILAFFFRFRILTPANDAYALWLISVICEIWFALSWILDQFPKWFPITRETYLDRLSLRFEREGEPNQLAPVDFFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRSMKREYEEFKVKINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNCKAVREAMCFLMDPNLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGGSRKSKSKKKSGKGLFSVFSKNKSKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSNSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKAAEDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSGAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02875 1048 CDD mRING-HC-C4C4_CesA 34 84 - -
Phco7g02875 1048 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 417 595 IPR029044 -
Phco7g02875 1048 FunFam Cellulose synthase 19 110 - -
Phco7g02875 1048 FunFam Cellulose synthase 421 595 - -
Phco7g02875 1048 SUPERFAMILY Nucleotide-diphospho-sugar transferases 317 852 IPR029044 -
Phco7g02875 1048 SUPERFAMILY RING/U-box 21 102 - -
Phco7g02875 1048 MobiDBLite consensus disorder prediction 1 34 - -
Phco7g02875 1048 Pfam Cellulose synthase 304 1041 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phco7g02875 1048 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 110 IPR013083 -
Phco7g02875 1048 Pfam Zinc-binding RING-finger 27 101 IPR027934 -
Phco7g02875 1048 Coils Coil 402 422 - -
Phco7g02875 1048 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 207 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02875 Phco-Chr7 47766903 47772259 Dispersed/Wgd