Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g02873 | ATGGGTGAAACTGAGGCTGAGAGTCCCTTAGGTGCACCCAGTATGAGCCCTATCACAACAGCCAAACCATGCACTCCATCTCCATCTGAACACAGCATCAATTTGATGGTTATTTTGGCAGCCATAGTGTGTGCTTGTCTTTGTGCTCTTGGTCTGAACACAATGTTACAATGTGTCTTCCAATGTGCCAATCGTGTTCTCACTCAACCCTTTCAATGGATTGCCTCAAGGAGACTGAATTCTGGCCTGAAGAAGACAGAAGTGGTGGCTCTGCCAACCTCAACCTATACCCATTCTGGTGGCTCTCCATCTAATTGTGCCATTTGCTTATCAGAGTTCTCTGATGGGGACAAGATAAGGTTCCTCCCAAACTGCAATCACCGTTTTCATGTTCATTGCATCGATAAGTGGCTGCTTTCTCACTCTTCTTGCCCAACTTGTAGGAACTTCCTCAAGTCTACTCATTCACTACACTCCTTGCATGTTCTAGTATCATAG | 498 | 0.4558 | MGETEAESPLGAPSMSPITTAKPCTPSPSEHSINLMVILAAIVCACLCALGLNTMLQCVFQCANRVLTQPFQWIASRRLNSGLKKTEVVALPTSTYTHSGGSPSNCAICLSEFSDGDKIRFLPNCNHRFHVHCIDKWLLSHSSCPTCRNFLKSTHSLHSLHVLVS | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g02873 | 165 | CDD | RING-H2_EL5-like | 106 | 148 | - | - | |
| Phco7g02873 | 165 | SMART | ring_2 | 106 | 147 | IPR001841 | - | |
| Phco7g02873 | 165 | SUPERFAMILY | RING/U-box | 99 | 154 | - | - | |
| Phco7g02873 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 153 | IPR013083 | - | |
| Phco7g02873 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
| Phco7g02873 | 165 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 25 | 154 | IPR044602 | GO:0016567|GO:0016740 | |
| Phco7g02873 | 165 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Phco7g02873 | 165 | Pfam | Ring finger domain | 105 | 148 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g02873 | Phco-Chr7 | 47759690 | 47760187 | Dispersed/Wgd |