Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g02864 | ATGGTGAAGTTTCTGAAGACGAACAAAGCAGTGATAGTGCTGCAGGGGCGTTACGCGGGGAAGAAGGCGGTGATAGTGCGAACCTTCGATGAGGGCACGCGCGAGCGCCCTTACGGTCATTGTTTGGTTGCAGGGATAAAGAAGTACCCTAGCAAGGTCATAAAGAAGGACTCTGCCAAGAAGACCGCGAAGAAGTCGCGCGTGAAGGCCTTCATCAAGCTCGTCAACTACCAGCACTTGATGCCAACGCGCTACACGCTCGACGTGGACCTCAAGGATGCCGTCTCCCCCGACGTCCTCCACGCGAAGGATAAGAAGGTCACTGCCCTCAAGGAAACCAAGAAGCGCCTCGAGGATCGTTTCAAAACCGGCAAGAACCGGTGGTTCTTCACCAAGCTCAGGTTCTGA | 408 | 0.549 | MVKFLKTNKAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDAVSPDVLHAKDKKVTALKETKKRLEDRFKTGKNRWFFTKLRF | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g02864 | 135 | Pfam | Ribosomal L27e protein family | 52 | 135 | IPR001141 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco7g02864 | 135 | Coils | Coil | 100 | 127 | - | - | |
| Phco7g02864 | 135 | ProSitePatterns | Ribosomal protein L27e signature. | 124 | 135 | IPR018262 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco7g02864 | 135 | SUPERFAMILY | Translation proteins SH3-like domain | 3 | 135 | IPR008991 | - | |
| Phco7g02864 | 135 | PANTHER | 60S RIBOSOMAL PROTEIN L27 | 1 | 135 | IPR001141 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco7g02864 | 135 | CDD | KOW_RPL27 | 6 | 88 | IPR041991 | - | |
| Phco7g02864 | 135 | Gene3D | - | 1 | 135 | IPR038655 | - | |
| Phco7g02864 | 135 | FunFam | 60S ribosomal protein L27 | 1 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g02864 | Phco-Chr7 | 47681470 | 47681877 | Wgd |