Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02855 ATGGAGGACAAAGAAAAAGGAGGGGAAGAAGTGAAGTACCGTGGTGTGAGAAAGAGGCCATGGGGTAAGTACGGAGCAGAGATTAGAGATCCAAAAAAACCTACGGGAAGACAGTGGTTAGGAACATTTGACACTGCAGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGAGGTGGCCTTGCAATCCTTAATTTTCCTCATGCATCAGCAAATTCTTCAACTACAGGCATTGGAACTTCTTCTTCTTCTTCTTCTTCACAGCAGAAGGAAGTTATTGAGTTCGAGTGTTTGGATGATAAGGTGTTGGAAGACCTTCTTGAATCAGAAGTGAAGAGAAGGAACCAAGATTAA 363 0.4298 MEDKEKGGEEVKYRGVRKRPWGKYGAEIRDPKKPTGRQWLGTFDTAEEAARAYDRAAIELRGGLAILNFPHASANSSTTGIGTSSSSSSSQQKEVIEFECLDDKVLEDLLESEVKRRNQD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02855 120 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Phco7g02855 120 Gene3D AP2/ERF domain 11 72 IPR036955 GO:0003700|GO:0006355
Phco7g02855 120 MobiDBLite consensus disorder prediction 72 94 - -
Phco7g02855 120 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 FunFam Ethylene-responsive transcription factor 2 12 71 - -
Phco7g02855 120 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Phco7g02855 120 PANTHER DNA-BINDING DOMAIN 6 111 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02855 Phco-Chr7 47597171 47597533 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g02855 AP2 4.4e-13 CL0081