Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02820 ATGACAATGCAAATCTCAAGTAAAAAGTTCGATCGAGCACCAAGCATTCGACAGCTGTTTCCACCAAAAAATCTTGAGGAAAGTAATGGATGTGACATATGCTCTGGTCAGTCCATCAATCATCAATGTAACACGCCAGAAACCAGAACCCATCAATGCTATGGTTCAAAACCACTTCTGTTAAAAGATGTGGCTCCTAGCCCCAGAAATTCCATATCTTCTGTTCCTTCCAATGCCCTTGAACATACTGTACCTATGCATCAACTAGTTGAACACTCAAGTACTTCTGCAATTTCATCTCATCAAGTTGATTATCAATTGGATATTAACCACATTTGTTCTTCGGAACCCCCCTCAACATTTCCTACCTTTCGAGATAGAATGCCAATGAGTCTTCGGATGTATTTGCCCTTATATAGAGCTGCTTTGAAAGGAGACTGGGAGAAGGCCAATGAGTTCCTAAATTTGCATCCTGGTGCGGAGAATGCCAGGATTTCAAGAGGGTGGGAAACAGCTCTTCATATTTCAGCTGGGGCTCGACGCACCAAATTTGTGGAGAAACTGGTCAAAAGAATGGAAACTAGAGACTTGGAAATTCAAAATAAAGATAAGAACACTGCACTTTGTTTTGCTGCTGCGTCTGGGATTACCAAGATAGCTAAGCTAATGGTGGAAAGGAATGTAAACTTACCTAGAATACGAGGTAGTGAAGGGGTGACACCACTTTATATAGCTACATTACTGGGCCAAAGGGACATGGTTTGGTATCTCTATTCAGTGACCGATGAACAGATTCTAAAAACAGAAGACTATTTTAGTCTACTAATTGCTGCTATATCTACTGATTTATATGATTTTGCCTTACATGTTCTGGAGTGTCGACCACAATTAGCGACTTATCATGGCTTGAATGGGGAGACAGCTTTACATGTGTTGGCAAAAAAGGCTTCATCATTTAGGAGCGGCATTCAACTGGGCATCTGGGAAAGATGCATCTATCCATGGATCCAAGTCAAACTAGCAACTGAGTACAAATGCCAGTCAAACAACTCGCTATCCCAGGCTCCTTCAACTTTTCAAGACCTATTGGTGAATGGACTCTGTCGTGCTGTAAAATATCTTGTGCCAGGATTTGAAACCGTTCAGAAGAAAAAGATATTGAACTTACAGGCTTTAAAGTTAGTGCAACATCTTTGGGAACTAGTAGAGTCATCAGACGAAATACACAATGGAGACTTAATTAAAAGCCCTTTGTCACGGCCCCTATTTATTGCTGCTGAATTTGGAATACCTGAGATTGTAACTGAGCTTCTTCACTCATATCCCGATCTACTCTGGAAAGTTGACAGCCAAAATAGAAGTCTTTTTCACATTGCAATCACGTATCGCCAGGAAAAAATATTTAACCTGATTTATGACATAGGGGCACATAAAGATCTGATAACTTCTTACAGAGACAATAACAATCACAACATACTGCATTTGGCTGGAAAATTGGCACCTTCAGATCAACTTCATGTTGTATCTGGTGCAGCACTGCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTGGAAAAGATCATACAGCCTCTATTGAAGGAGATTAAGGATTCTGAAGGTAGAACGCCTCAAATGCTATTTACCGAGGAACACAAGGGCTTGGCCAAAGAAGGAGAAAAATGGCTGAAGAGCACTGCGTCATCATGCATGCTAGTTTCTACTCTTATTACCACTGTGATGTTTGCAGCAATATTTACGGTACCAGGTGGGAACAACAACGATAATGGATATCCTATTTTTATGCGCACTACATCCTTCAAAGTTTTTGCTGTCTCAGATGCTCTTGGATTATTCTCCTCAGTAGTATCTATATTGATGTTTTTGTCAATACTCACCTCTAGGTATGCACAGGAGGATTTCCTTGTGTCACTGCCAAAAAGGTTGAGTGTTGGCATTGCGACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACATTTTTCATTGTACTTGGCCATCAATTGGCATGGATTGTAATTCCAATAACCCTTGTCGCATGTATCCCAACAATATTGTTTGCCTTTTTACAGTTTCCTCTTCTTGTTGATACAATCTCTTGTACATATGGAGCTGGTGTATTTGCCCGTTGA 2163 0.4059 MTMQISSKKFDRAPSIRQLFPPKNLEESNGCDICSGQSINHQCNTPETRTHQCYGSKPLLLKDVAPSPRNSISSVPSNALEHTVPMHQLVEHSSTSAISSHQVDYQLDINHICSSEPPSTFPTFRDRMPMSLRMYLPLYRAALKGDWEKANEFLNLHPGAENARISRGWETALHISAGARRTKFVEKLVKRMETRDLEIQNKDKNTALCFAAASGITKIAKLMVERNVNLPRIRGSEGVTPLYIATLLGQRDMVWYLYSVTDEQILKTEDYFSLLIAAISTDLYDFALHVLECRPQLATYHGLNGETALHVLAKKASSFRSGIQLGIWERCIYPWIQVKLATEYKCQSNNSLSQAPSTFQDLLVNGLCRAVKYLVPGFETVQKKKILNLQALKLVQHLWELVESSDEIHNGDLIKSPLSRPLFIAAEFGIPEIVTELLHSYPDLLWKVDSQNRSLFHIAITYRQEKIFNLIYDIGAHKDLITSYRDNNNHNILHLAGKLAPSDQLHVVSGAALQMQRELLWFKEVEKIIQPLLKEIKDSEGRTPQMLFTEEHKGLAKEGEKWLKSTASSCMLVSTLITTVMFAAIFTVPGGNNNDNGYPIFMRTTSFKVFAVSDALGLFSSVVSILMFLSILTSRYAQEDFLVSLPKRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPITLVACIPTILFAFLQFPLLVDTISCTYGAGVFAR 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02820 720 FunFam Ankyrin repeat-containing protein ITN1 isoform C 385 557 - -
Phco7g02820 720 Gene3D - 386 557 IPR036770 -
Phco7g02820 720 PANTHER CASKIN 166 714 - -
Phco7g02820 720 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g02820 720 Gene3D - 133 325 IPR036770 -
Phco7g02820 720 Pfam Ankyrin repeats (3 copies) 138 229 IPR002110 GO:0005515
Phco7g02820 720 SUPERFAMILY Ankyrin repeat 137 497 IPR036770 -
Phco7g02820 720 SMART ANK_2a 168 199 IPR002110 GO:0005515
Phco7g02820 720 SMART ANK_2a 133 162 IPR002110 GO:0005515
Phco7g02820 720 SMART ANK_2a 237 267 IPR002110 GO:0005515
Phco7g02820 720 SMART ANK_2a 451 480 IPR002110 GO:0005515
Phco7g02820 720 SMART ANK_2a 203 232 IPR002110 GO:0005515
Phco7g02820 720 Pfam Domain of unknown function 560 673 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02820 Phco-Chr7 47280226 47293501 Dispersed/Transposed