Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02817 ATGAAGTATATTCGGAGCAACAGCTTGAAGAGACTTTTCTCGTTTGGAAAACGCGGGTTTGGGGAAGAAAACGATGTGGGGTTGGTGGTTCCTTCATGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCCTTTAAAGAGTTGTTTGATGCCACCAGTGGTTTTAGCTCAGGGAATTTGGTTGGGAGAGGAGGGTATGCAGAGGTTTATAAGGGAACGTTGCGTGGTGGTGAGGAAGTTGCGGTGAAGAGGCTCACCAGAACTTCAACTGATGAGAGGAAGGAGAAGGAGTTTCTGATAGAGATTGGCACAATTGGTCACGTGCGCCATGCCAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGTTCTGTTGCTTCTGTTATTCACGATGAGAACTTGCCTCCTTTAGATTGGAAAACAAGGTATAAGATAGCTCTTGGGACTGCTCGTGGTCTTCACTACTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGGGACATCAAGTCCTCAAACATTTTGTTAACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTTCCATCTCAGTGGACTCACCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTGGCACCAGAGTACTATATGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAATCCTCTCTGGAAGGAAACCAGTGGATGGGTCTCACCAAAGCGTGCACAGCTGGGCTAAACCAATACTAAACAAAGGGGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGAGTAGCCTTTGCTGCCTCCCTGTGCATTCGGGCATCTGCAACTTGCAGACCTACCATGAGTGAGGTACTGGAGGTAATGGAGGAGTGGGAGATGGATAAAGAGAAGTGGGAAATGGCAGAGGAGAAAGAAGAAGAGGTAGAGCTATGGGGTTTTGAGGATCTGGAATATGCATATGACAGTTCCTTTTCAATGTCTCTACCTGACTCGGTTGGAAGTACTTAG 1116 0.4615 MKYIRSNSLKRLFSFGKRGFGEENDVGLVVPSCEEHPPRPSWKCFSFKELFDATSGFSSGNLVGRGGYAEVYKGTLRGGEEVAVKRLTRTSTDERKEKEFLIEIGTIGHVRHANVLPLLGCCIDNGLYLVFELSTVGSVASVIHDENLPPLDWKTRYKIALGTARGLHYLHKGCKRRIIHRDIKSSNILLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEILSGRKPVDGSHQSVHSWAKPILNKGEIEKVVDPRLGGAYDVTQFNRVAFAASLCIRASATCRPTMSEVLEVMEEWEMDKEKWEMAEEKEEEVELWGFEDLEYAYDSSFSMSLPDSVGST 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02817 371 Gene3D Phosphorylase Kinase; domain 1 32 133 - -
Phco7g02817 371 FunFam Putative receptor-like serine/threonine-protein kinase 27 133 - -
Phco7g02817 371 PANTHER OS08G0249100 PROTEIN 35 352 IPR046958 -
Phco7g02817 371 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02817 371 CDD STKc_IRAK 63 326 - -
Phco7g02817 371 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Phco7g02817 371 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02817 371 SUPERFAMILY Protein kinase-like (PK-like) 35 328 IPR011009 -
Phco7g02817 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Phco7g02817 371 FunFam Putative receptor-like serine/threonine-protein kinase 135 348 - -
Phco7g02817 371 Coils Coil 324 344 - -
Phco7g02817 371 Pfam Protein tyrosine and serine/threonine kinase 60 265 IPR001245 GO:0004672|GO:0006468
Phco7g02817 371 Gene3D Transferase(Phosphotransferase) domain 1 135 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02817 Phco-Chr7 47259104 47262783 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco7g02817 PK_Tyr_Ser-Thr 4.1e-41 CL0016