Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02816 ATGGCAGAAAATATGAAGAGAAGCAGCTTCGAAGTGTTGGGAATGTGCTGTGCTACAGAAGCAGCACTGGTTGAAAGAATTGTGAAGCCTCTTCATGGAGTCAAACATGTTTCAGTGATAGTCCCTACACGAACAGTCACTGTGGTCCATGATGTTCTCTTCATTTCTGAGTCACAAATAGCTGATGCACTAAATGCTGCAAGGCTTGAAGCTAGTTTGAGACTACAGGGAGAGACTGATAATGAAAAGAAATGGCCAGATTTAACTACAATGGTGTGTGGCTTGTTTCTGGCACTTTCTTTCTTGAAATATGTATATCACCCTTTGGAATGGTTGGCACTTGGTTCTGTTGTCATTGGCTTCCCTAAGGTTCTACTCAGGGCCATTGCATCCATTAAGGCTCTGACTCTTAATATCAACATTCTGGTTCTATTGGCAGTGTGTGGTACTGCTGCTTTACGAGATTTTTGGGAGGCTGGTGTCATCATCTTCTTATTCTCCATTGCTCAATGGCTTGAGACAAGAGCAACTCAGAAGGCAAAGGTTGCAATGTCCTCTTTGACTAGCATGGCTCCCCAAAAGGCTGTTATTGCTGAAACTGGGGAACGTGTTGACGTCAATGATGTTAAGATCGACACCATACTTGCAGTGAGGTCGGGTGACGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTACCTGTGATCAAAGAGTTTGATTCAGTAGTATGGGCTGGAACTATTAATGTGAATGGATATATAAGTGTAAAAACTACTGTGCTGGCAAAAGACACAGTGGTGGCTAGAATGTCAAAACTTGTTGAAGAGGCCTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATAATTTTGCTAAGTACTACATTCCTGCTGTTGTTTTGATTTCAGCTAGCATTGCTGTGGTTCCAGCTGCAATAGAAGTTCCTGATATAAAACCTTGGCTCCATCTTGCAATTGTGGTTTTGTTAAGTGCATGCCCCTGTGCTCTCATCCTCTCCACTCCCGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAACAAGTGGGTTACTACTGAAAGGTGGAGATTATATTGAAACACTTTCTGGAATTAAGACAGTGGCTTTTGATAAAACTGGCACAATAACAAGAGGAGAGTTCACAGTGACAGATTTTTCATTTGTAGATGACATTAGCATTGAAACTTTACTGTACTGGGTTTCAAGTATTGAGAGTAAGTCAAGTCATCCTATGGCAGCTTCACTAGTGGAATACGGAATGTCTTATTCTGTCAGGCCAATCCCTGAAAATGTGGAGAATTTTGAAAATTTTGCTGGGGAAGGAGTTTTCGGTACAATTGATGGGAAGGATATCTATATTGGCAATAGAAGAATTGGTGCTAGGGCTAACTCCGCAAGAGTTGATTGCCACTTGCAATTTCAAAGCCATGAAATTTCTACCCCGAAAGAACACTGTGGACCGACTCTGGTTGGAGTCTTCAGCTTAGTTGATACTTGCAGATCAGGTGCTTTGGAGGCAATAGAAGAGCTAAAGTTGTTAGGCGTGAGATCTGTCATGTTAACAGGAGATAGCACTCAGGCTGCTATGCATGTTCAAAGTCAGTTGAACTATGGTCTAGACCTTGTACATGCAGAGCTTCTACCTGCGGAAAAGGCAGTGATCATTGAGAATTTGAAGAAAGATGGGCTAATAGCCATGATTGGAGATGGCATAAATGATGCTCCTGCATTAGCCACAGCTGACATTGGTATCTCAATGGGAATATCTGGTTCAGCTCTTGCAAATGAGACAGGCAATGCAATTCTTATGTCGAATGACATCCAAAAGATACCTGAAGCCATTCGGCTTGCAAGGAAAACCACTAGAAAGCTCATTGAGAATGTCATTATTTCAGTTGGCTTCAAGAGTGCTATACTTGCATTGGCAATTGCTGGATACCCTATTGTCTGGCTTGCTGTGTTGACTGACGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTAATTTTACAAGAGAAACCAAAATATGCAAGAAAATCTAAATATGGCACCTTCTTGGAAGATTTGACCATGAATCTACTTGACAATGAAAGTAACAACATTAAGAACCAAGAGTTTCTTACTGCTGAAAAATGTAGTAAAGATTGTTGTAAAGATGGCACTTATCAAGTTGAAACTACAAGCAAGAATGAATCTTCTGGACTTTTGAAGTTGAGCTCACTCAAGGGAAACCACAGCGGAAACTCGGTCTCTATTGAAGTGCATATAGTGAAACCAAGCAATGGTTGTTGTCTAAGTAAAGTAAAAATGCACGAGGACTCCGCATGCAGAACAAAAAATGGTTCTGGTTGTTGCCAAGAACAATCTAAAAAATGTGTCATTGGTTCTGTTGCCAGAGAAGATGCCAGCATTGATTCCTTGGAGTCTGATTGCCTTAAGGACAAGTCTGTGGATATTCCAGAGGTTTCTGGGACAGAAGGTATTCCAAAGTGCTGCAATAAGACATGCTGTAATGACAGTTTAAATAATATGACTAGCCTTAGCCATCCAGAAATTATTATAGAGGGAATTCCTGGCTATGCTACATCTGAACTTTGGATTCCAAATTTTCCTCTAACTCAGAAGTCCTGTGAGATAGAGGCTCAAAATAGGGAGATTGCAGAAAGAACAATTAAGGTAGCTCTGTCATGTGTTCAGTATAAGCCAGAATCAAGACCTACAATGAGTGTTGTAGTGAAAATGTTAGAAGGATCTGTTGAAGTTCCTAAACCTCCGAATCCATTTGCACACCTAATTGATTGGACTTCCCCCACTGCTGATACAATTATCATTATTGTGAAGGTTGGTATTTTCTTTTGCATATTGCGTGTATGCATAAGAAGATATCAGGTTAATGGGGTTAAAGGTGTTAATGGTGGTATTGGATACTTTAAACAAACAGGAACAAGGACACCAGATAAACAATTTATGACACTTACTATGGATAAATTTCTGAATGATATGGAAAGGGAGAAGCCAATCAGGTTCACTGATCAGCAGCTAAAAATTGCAACTGATAATTACTCTTATCACTTGGGGTCAGGAGGTTTTGGGTCTGTTTACAAAGGAAGTTTTAGTAATGGAACCATTATAGCTGTGAAAGTTCTACTTGGGAGTTCTGACAAAAGAATTGAAGAGCAGTTTATGGCAGAAGTGGGTACCATTGGTAAAGTACATCACTTCAATCTAGTTCGTCTATATGGCTTTTGCTTTGAAAGACACCTGAGAGCGCTGGTTTACGAGTACATGGTGAATGGGTCGCTTGAAAAGTACCTTTTTCATGAAAGCACGATCTTATCATTTGAAAAGCTCCATGAGATCGCAATTGGTACAGCCAGAGGCATTGCTTACTTGCATGAAGAGTGTCAGCAGAGAATAATCCACTATGATATTAAACCAGGAAATATTCTCTTGGATAGGAACTTTTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGATCATACTCATATAAGCATGACTGCGGGTAGGGGGACTCCTGGTTATGCTGCACCGGAACTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGTTGTTATTTGAAATCATTGGCAGGAGAAAAAATCATAACATCAACGTTCCAAAAAGTCAGGTTTGGTTTCCAAAGTGGGCTTGGGAAAAATTTGCTGCTGGAGAAGTGGTGGAGTTGATAACTTCCTGTGGGATAGAGGATAAAGATAGGGAGATTGCAGAAAGAATTGTTTATGTAGCTTTGTCATGTGTTCAACACAGGCCAGAAGCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCTTTTGAAGTTCCAAAGCCTCCAAACCCATTTCAACACCTGATTGGTTGGGTTCCACCCACTCCTGACACTGACACAAATGCCAGTTCTGACAATTCAGCATTGGTAACAAAATCTGTCCCTGTACTTGCCACTCATGGTATGACCTACGAGATTGAATTAGCGTCTGCATAA 4110 0.4071 MAENMKRSSFEVLGMCCATEAALVERIVKPLHGVKHVSVIVPTRTVTVVHDVLFISESQIADALNAARLEASLRLQGETDNEKKWPDLTTMVCGLFLALSFLKYVYHPLEWLALGSVVIGFPKVLLRAIASIKALTLNINILVLLAVCGTAALRDFWEAGVIIFLFSIAQWLETRATQKAKVAMSSLTSMAPQKAVIAETGERVDVNDVKIDTILAVRSGDAIPLDGIVVEGKCEVDEKMLTGESLPVIKEFDSVVWAGTINVNGYISVKTTVLAKDTVVARMSKLVEEASSRKSRTQRFIDNFAKYYIPAVVLISASIAVVPAAIEVPDIKPWLHLAIVVLLSACPCALILSTPVAIFCALTKAATSGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFTVTDFSFVDDISIETLLYWVSSIESKSSHPMAASLVEYGMSYSVRPIPENVENFENFAGEGVFGTIDGKDIYIGNRRIGARANSARVDCHLQFQSHEISTPKEHCGPTLVGVFSLVDTCRSGALEAIEELKLLGVRSVMLTGDSTQAAMHVQSQLNYGLDLVHAELLPAEKAVIIENLKKDGLIAMIGDGINDAPALATADIGISMGISGSALANETGNAILMSNDIQKIPEAIRLARKTTRKLIENVIISVGFKSAILALAIAGYPIVWLAVLTDVGTCLLVILNSMLILQEKPKYARKSKYGTFLEDLTMNLLDNESNNIKNQEFLTAEKCSKDCCKDGTYQVETTSKNESSGLLKLSSLKGNHSGNSVSIEVHIVKPSNGCCLSKVKMHEDSACRTKNGSGCCQEQSKKCVIGSVAREDASIDSLESDCLKDKSVDIPEVSGTEGIPKCCNKTCCNDSLNNMTSLSHPEIIIEGIPGYATSELWIPNFPLTQKSCEIEAQNREIAERTIKVALSCVQYKPESRPTMSVVVKMLEGSVEVPKPPNPFAHLIDWTSPTADTIIIIVKVGIFFCILRVCIRRYQVNGVKGVNGGIGYFKQTGTRTPDKQFMTLTMDKFLNDMEREKPIRFTDQQLKIATDNYSYHLGSGGFGSVYKGSFSNGTIIAVKVLLGSSDKRIEEQFMAEVGTIGKVHHFNLVRLYGFCFERHLRALVYEYMVNGSLEKYLFHESTILSFEKLHEIAIGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDHTHISMTAGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRKNHNINVPKSQVWFPKWAWEKFAAGEVVELITSCGIEDKDREIAERIVYVALSCVQHRPEARPIMSVVVKMLEGSFEVPKPPNPFQHLIGWVPPTPDTDTNASSDNSALVTKSVPVLATHGMTYEIELASA 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02816 1369 Pfam Protein tyrosine and serine/threonine kinase 1044 1310 IPR001245 GO:0004672|GO:0006468
Phco7g02816 1369 Gene3D Phosphorylase Kinase; domain 1 1015 1116 - -
Phco7g02816 1369 NCBIfam HAD-IC family P-type ATPase 508 668 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco7g02816 1369 NCBIfam HAD-IC family P-type ATPase 161 408 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco7g02816 1369 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 694 - -
Phco7g02816 1369 ProSitePatterns Protein kinases ATP-binding region signature. 1046 1068 IPR017441 GO:0005524
Phco7g02816 1369 FunFam Putative cadmium/zinc-transporting ATPase 3 2 75 - -
Phco7g02816 1369 Gene3D Transferase(Phosphotransferase) domain 1 1117 1317 - -
Phco7g02816 1369 SUPERFAMILY Protein kinase-like (PK-like) 1023 1311 IPR011009 -
Phco7g02816 1369 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Phco7g02816 1369 SFLD C1.7: P-type atpase like 371 640 - -
Phco7g02816 1369 CDD HMA 10 72 IPR006121 GO:0046872
Phco7g02816 1369 ProSiteProfiles Protein kinase domain profile. 1040 1314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02816 1369 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Phco7g02816 1369 SUPERFAMILY HAD-like 386 688 IPR036412 -
Phco7g02816 1369 FunFam PR5-like receptor kinase 1117 1319 - -
Phco7g02816 1369 Pfam haloacid dehalogenase-like hydrolase 384 601 - -
Phco7g02816 1369 Gene3D - 177 291 - -
Phco7g02816 1369 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Phco7g02816 1369 SFLD p-type atpase 371 640 IPR044492 -
Phco7g02816 1369 NCBIfam cadmium family heavy metal-translocating P-type ATPase 139 691 - -
Phco7g02816 1369 FunFam serine/threonine-protein kinase PBS1-like 1011 1116 - -
Phco7g02816 1369 Gene3D - 2 75 - -
Phco7g02816 1369 Pfam E1-E2 ATPase 198 366 - -
Phco7g02816 1369 FunFam Putative cadmium/zinc-transporting ATPase 3 399 519 - -
Phco7g02816 1369 FunFam Copper-transporting ATPase 1, putative 177 291 - -
Phco7g02816 1369 SUPERFAMILY Calcium ATPase, transduction domain A 202 287 IPR008250 -
Phco7g02816 1369 CDD P-type_ATPase_HM 90 689 - -
Phco7g02816 1369 Gene3D - 379 638 IPR023214 -
Phco7g02816 1369 PRINTS P-type cation-transporting ATPase superfamily signature 533 543 - -
Phco7g02816 1369 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Phco7g02816 1369 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Phco7g02816 1369 PRINTS P-type cation-transporting ATPase superfamily signature 511 522 - -
Phco7g02816 1369 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Phco7g02816 1369 Gene3D - 399 519 IPR023299 GO:0000166
Phco7g02816 1369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1160 1172 IPR008271 GO:0004672|GO:0006468
Phco7g02816 1369 ProSitePatterns Hypothetical cof family signature 2. 587 609 - -
Phco7g02816 1369 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Phco7g02816 1369 SMART serkin_6 1040 1310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02816 1369 NCBIfam heavy metal translocating P-type ATPase 139 689 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02816 Phco-Chr7 47233933 47243396 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Phco7g02816 PK_Tyr_Ser-Thr 1.1e-45 CL0016