Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02815 ATGGATAACTTTCTGAACGAGATTGAAAAGGAGAAGGTAATCAGGTTTACTGAACAGAACCTAAGAATTGCAACTGATAACTATTCTTCATTGATGGGGTCAGGAGGTTTTGGAAAAGTCTATAAGGGAAATTTTAGTGATGGGACCATTGTAGCCGTGAAAGTTCTACATGCCCTTTCTGAAGAGAGAATTGAGGAGCAGTTTATGGCCGAAGTGGGAACAGTTGGAAAAGTTCATCATTTCAATCTGGTTCGACTCTATGGTTTTTGTTTGGAAAGAAACTTTACAGCACTGGTTTATGAGTACATGGTGAATGGTTCTCTTGACAAGTTTTTGTTTAATTCAGACAAGGCCATAGGTTTTGAAAAGCTTTATGAGATTGCAGTTGGAACAGCCAAAGGCATTTCTTACTTGCATGAAGAGTGTCAACAAAGAATTATCCACTACGACATAAAACCAGGAAATATTCTCTTGGATAGAATCTTCAATGCTAAAGTTGCTGATTTTGGTTTAGCCAAACTATGCAATAGAGAAATACTCATATTACCTTGA 552 0.3714 MDNFLNEIEKEKVIRFTEQNLRIATDNYSSLMGSGGFGKVYKGNFSDGTIVAVKVLHALSEERIEEQFMAEVGTVGKVHHFNLVRLYGFCLERNFTALVYEYMVNGSLDKFLFNSDKAIGFEKLYEIAVGTAKGISYLHEECQQRIIHYDIKPGNILLDRIFNAKVADFGLAKLCNREILILP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02815 183 Pfam Protein tyrosine and serine/threonine kinase 30 175 IPR001245 GO:0004672|GO:0006468
Phco7g02815 183 Gene3D Transferase(Phosphotransferase) domain 1 103 179 - -
Phco7g02815 183 FunFam Os07g0541700 protein 103 179 - -
Phco7g02815 183 FunFam serine/threonine-protein kinase PBS1-like 2 102 - -
Phco7g02815 183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Phco7g02815 183 SUPERFAMILY Protein kinase-like (PK-like) 11 178 IPR011009 -
Phco7g02815 183 Gene3D Phosphorylase Kinase; domain 1 2 102 - -
Phco7g02815 183 ProSiteProfiles Protein kinase domain profile. 26 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02815 183 PANTHER OS07G0415500 PROTEIN 4 177 - -
Phco7g02815 183 SMART serkin_6 26 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02815 Phco-Chr7 47232202 47232753 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Phco7g02815 PK_Tyr_Ser-Thr 1.5e-32 CL0016