Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02812 ATGGACACTGGGGGTCTCATAGTCATAGCTGTTCTGTTAGTGTTCGTGATTCTCTGCCTGTTTTGTTTCTGTAAAGCATCGAAAAGAGAAACTGATGGGTTGTCAGAAAGGAATTTTGTCCACATTGACAATATTTTGAGGAACATGGAAAGAGAAAAGCCAATCAGGTTTACTGGGGAGCTGCTTAGGATTGCAACAGATAATTACTCTATATCGTTGGGGTCAGGAGGTTTTGGAGAAGTTTACAAAGGAAATTTAAGTGATGGAACAACTGTGGCTGTGAAGGTTCTACGCGCAAATTCTTACAAGAGAATTGAGGAACAGTTTATGGCAGAAGTGGGTACAATTGGAAAAGTTCATCATTTCAACCTAGTTAAGTTGTATGGATTTTGCTTTGAAAAAGAGCTAAGAGCTCTGGTTTATGAGTACATGAAGAATGGATCTCTTGACAAGTATCTGTTTCATGAAAACAAGACCCTGGGATATGAAAAGCTTCATGAGATTGCAGTTGGGACAGCCAGAGGAATTTCATACTTGCATGAAGATTGTGAACAAAGAATAGTCCACTGTGACATCAAACCAGGAAATATTCTCTTGGACAACAACTTCAATCCTAAAGTTGCTGATTTTGGATTAGCTAAACTCTGCAACAGGGACAATACTCATATAACCATGACAGGAGGTAGGGGCACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGAAGGAGAAGAAATCTTGACATTAACCTTCCCCAAAGTGAAGAGTGGTTTCCAGTATGGGCTTGGAAAAGATTTGATGGTGGAGAATTGGAAGTGTTAATAAATGCTTGTAAGATTGAGGAGAGGTATAAGAAAATGGCTGAAAGAATGGTGAAGGTAGCTTTGTCTTGTGTTCAATATAGGCCAGAATCAAGGCCAATTATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTAGAAATTTCTAAACCATCTAACCCGTTTCAGCATATCATAGGTGGAACTTTCCAGGCTCATTCTGTCCATGCATCCCAAACTGATGTTAATACAAGTATCAATTCCAGCTCTTCTTTTAAGGTAACCCAATCAGGCATTGTACATGACATTCCTCATCACAGGAATGATGACATTGAATTGGCTTCAATGGAAGTTCTGCATTTCTTCAATAACTGA 1239 0.3947 MDTGGLIVIAVLLVFVILCLFCFCKASKRETDGLSERNFVHIDNILRNMEREKPIRFTGELLRIATDNYSISLGSGGFGEVYKGNLSDGTTVAVKVLRANSYKRIEEQFMAEVGTIGKVHHFNLVKLYGFCFEKELRALVYEYMKNGSLDKYLFHENKTLGYEKLHEIAVGTARGISYLHEDCEQRIVHCDIKPGNILLDNNFNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDINLPQSEEWFPVWAWKRFDGGELEVLINACKIEERYKKMAERMVKVALSCVQYRPESRPIMSDVVKMLEGSVEISKPSNPFQHIIGGTFQAHSVHASQTDVNTSINSSSSFKVTQSGIVHDIPHHRNDDIELASMEVLHFFNN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02812 412 SUPERFAMILY Protein kinase-like (PK-like) 49 338 IPR011009 -
Phco7g02812 412 FunFam serine/threonine-protein kinase PBS1-like 40 143 - -
Phco7g02812 412 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Phco7g02812 412 PANTHER OS07G0415500 PROTEIN 8 350 - -
Phco7g02812 412 Pfam Protein tyrosine and serine/threonine kinase 72 337 IPR001245 GO:0004672|GO:0006468
Phco7g02812 412 Gene3D Phosphorylase Kinase; domain 1 42 143 - -
Phco7g02812 412 SMART serkin_6 67 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02812 412 ProSiteProfiles Protein kinase domain profile. 67 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02812 412 FunFam Putative receptor-like protein kinase 144 345 - -
Phco7g02812 412 Gene3D Transferase(Phosphotransferase) domain 1 144 351 - -
Phco7g02812 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02812 Phco-Chr7 47222175 47223523 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Phco7g02812 PK_Tyr_Ser-Thr 8.9e-50 CL0016