Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02811 ATGAGAACAACAACATGTTGGCATGGCATTGGCATTGGCAATGCAACAAGAAGAGTGGGGATTGCCCTGAAGATAGGTATTTTGATTTGTGTGTGCAGAAAAAGAAATCAGAAGGATGTTAGATCAGTAGTTTCAGGTTCAAAATTTCTGACTCGGACTATGGATAAATTTCTTAATGACATGGAAAGGGAGAAGCCAATCAGATTCACTTGTCAACAACTAAGGATTGCAACTGACAACTACTCTAACTTGTTGGGATCAGGAGGTTTTGGAACAGTTTATAAGGGAATTTTTAGTAATGGGACCATTGTTGCTGTGAAGGTTCTGCGAGGGAATTCAGACAAGAAAATCGAGGAGCAGTTTATGGCAGAAGTGGGTACCATTGGCAGAATTCATCATTTTAATCTTGTTAGACTCTATGGATTTTGCTTTGAAGAAAACCTGATAGCACTTGTGTATGAGTACATGAGTAATGGCTCTCTTGATAGTTATTTGTTCCATGAAAAGAAGACCATAGGATATGAAAAGCTTCATGAGATTGCAGTGGGAACAGCTAGAAGCATTGCTTATTTGCATGAGGAGTGTCTACACAGAATAATCCATTACGACATAAAACCAGGAAATATTCTCTTGGATAGGAATTTCAATCCTAAAGTTGCTGATTTCGGTTTAGCCAAACTTTGCAACAGGGACAATACTCATATAACCATGAGTGGAGGTAGGGGAACTCCAGGTTATGCTGCACCTGAGCTTTGGATGCCGTTTCCTATAACTCCCAAGTGTGATGTTTATAGTTTTGGCATGGTTCTATTTGAAATCGTAGGCAGAAGAAGAAACATTGATATTAAACTTGCTGGAAGCCAAGAGTGGTTTCCAATATGGGTTTGGGAAAAATTTGATTCTGGACAATTGGGGGAGTTGATGATAGTCTGTGGGATAGAGGAGGAGAAAGCTAAGGAGATTGCAGAAAGAATGATTAAGATAGCTTTTTGGTGTGTTCAGTATAGGCCAGAATTAAGGCCCATAATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATTCCAGAACCTGACAACCCGTTTCAGCATTTCATGGGTGGGATTACCATTGCTCATCCAGTCCCAGTGTCACAAACCTATAATACAGCAAGTTTTTCATCTGGTTCTTCTGTCATGGTAACAAACTCCAGCATTGTACCTGGTACTCCTCTTATGAGGAAGTACGAAATTGAATTAGCCTCTAGCAATGAGTGA 1260 0.4 MRTTTCWHGIGIGNATRRVGIALKIGILICVCRKRNQKDVRSVVSGSKFLTRTMDKFLNDMEREKPIRFTCQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTIVAVKVLRGNSDKKIEEQFMAEVGTIGRIHHFNLVRLYGFCFEENLIALVYEYMSNGSLDSYLFHEKKTIGYEKLHEIAVGTARSIAYLHEECLHRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRDNTHITMSGGRGTPGYAAPELWMPFPITPKCDVYSFGMVLFEIVGRRRNIDIKLAGSQEWFPIWVWEKFDSGQLGELMIVCGIEEEKAKEIAERMIKIAFWCVQYRPELRPIMSVVVKMLEGSVEIPEPDNPFQHFMGGITIAHPVPVSQTYNTASFSSGSSVMVTNSSIVPGTPLMRKYEIELASSNE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02811 419 ProSiteProfiles Protein kinase domain profile. 79 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02811 419 FunFam serine/threonine-protein kinase PBS1-like 50 155 - -
Phco7g02811 419 Gene3D Phosphorylase Kinase; domain 1 53 155 - -
Phco7g02811 419 FunFam Putative receptor-like protein kinase 156 358 - -
Phco7g02811 419 PANTHER OS07G0415500 PROTEIN 27 363 - -
Phco7g02811 419 Pfam Protein kinase domain 83 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02811 419 Gene3D Transferase(Phosphotransferase) domain 1 156 360 - -
Phco7g02811 419 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Phco7g02811 419 SMART serkin_6 79 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02811 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Phco7g02811 419 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02811 Phco-Chr7 47218914 47220982 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Phco7g02811 Pkinase 1.2e-46 CL0016