Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02770 ATGGAGAATATTGGTGAAGAGTACAAGCATTATTGGGAGACCACCATGTTCCTCCAGACCCAAGAGCTTGACAGTTGGGGGTTGGATGAGGCTTTATCAGGGTACTACGATTCCAGTTCCCCTGATGGTGCTGCTTCATCTGCAGCTTCTAAGAACATTGTTTCCGAGAGGAATAGGAGGAAGAAGCTCAATGAAAGGCTTTTCGCGCTTAGATCGGTGGTTCCTAAAATCAGCAAGATGGATAAGGCTTCTATTATTAAGGATGCTATTGAACACATCCAGGATCTGCACGAGCAAGAGAAGATAATCCAAGCTGAGATAATGGATCTTGAATCTGGGATGCCAAAAAAGAGTAGTTCAAGCTATGATTTTGAGCAGGAACAGCTTCCTGTGGTGCTGAGGTCCAAGAAGAAGAGAACCGAGCAGATATACGATTCAGTCAGTTCAAGAAACTCCCCAATTGAAGTCCTTGATCTGAGCGTTAACTACATGGGGGAGAAAATTGCTGTGGTGAGTTTGACATGTAGCAAAAGAACAGACACAATGGTGAAACTGTGCGAGGTGTTCGAATCTTTGAAGCTGAAGATCATCACTGCTAACATCACTTCGTTTTCAGGGAAGCTTCAGAAAACAGTCTTCATCGAGGCCAATGAAGAAGAGAAATATCATTTGGAGATAAAGATCCAGACAGCCATTGCAGCTCTTAACGAACCTCTAAGCCCCATGAGCATTTAA 735 0.4367 MENIGEEYKHYWETTMFLQTQELDSWGLDEALSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPKISKMDKASIIKDAIEHIQDLHEQEKIIQAEIMDLESGMPKKSSSSYDFEQEQLPVVLRSKKKRTEQIYDSVSSRNSPIEVLDLSVNYMGEKIAVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGKLQKTVFIEANEEEKYHLEIKIQTAIAALNEPLSPMSI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02770 244 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 116 - -
Phco7g02770 244 Pfam Helix-loop-helix DNA-binding domain 54 96 IPR011598 GO:0046983
Phco7g02770 244 SMART finulus 53 102 IPR011598 GO:0046983
Phco7g02770 244 Gene3D - 44 113 IPR036638 GO:0046983
Phco7g02770 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Phco7g02770 244 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 227 - -
Phco7g02770 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02770 Phco-Chr7 46791906 46797472 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco7g02770 HLH 4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02770 7 46791906 46797472 Phco7g02770 7 46791906 46797472 ECH
Phco8g01844 8 19381125 19389297 Phco7g02770 7 46791906 46797472 PCT