Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02752 ATGGCACTGGATATGCTCGATCTTCTTCCCAGAACAAGGATGGAGGAACAGTTAGCAATTCAAGAAGCTGCTTCAGCTGGTTTGAAAAGCATGGAGCATCTCATTCGACTCCTTTCTCCATCTGCATCTGCCTGCAATTCTTCTTCTTTTTCTTCTTCTAACAACAACAATAACCACGTTAGCCTCAACAACCTTGACTGCTCCGAAATCACCGACTTCACCGTCTCCAAGTTCAAACAAGTCATTAACCTTCTCAACCGCACCGGCCACGCCCGCTTCCGCCGTGCACCGACCCAAGCCCAAGCCCAGGCCCAGCCGCAACCAGAACCACAACCGCAGCCTCAACCTCAATCCCAACAAGGCTTTACTTTGGATTTCGTTAAACCCACCATTCTCAACTCTAAGCCCTGCAACAAAGACGAAACCCTCACTCTTTCCACCACCACCACCACATCCTCTTCCTTTTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCCTCTCTCCTCCTCCCACAGGAAAAAGTGCCGCGACGCCGCGCTGTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAAAAAACGATCCGCGTCCCGGCGATAAGTTCCAAGATCGCCGACATCCCACCGGACGAGTACTCGTGGAGAAAGTACGGCCAGAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTATTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGCGCGCAAGATGATCCGAAGATGCTGATAGTGACGTACGAGGGTGAGCACCATCACGCGCAGCCGTTACCTGCTGCAACCGGCGTTCGTTTCGGCCTTTGA 906 0.5442 MALDMLDLLPRTRMEEQLAIQEAASAGLKSMEHLIRLLSPSASACNSSSFSSSNNNNNHVSLNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPTQAQAQAQPQPEPQPQPQPQSQQGFTLDFVKPTILNSKPCNKDETLTLSTTTTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPPLSSSHRKKCRDAALSAKPSCHCSKKRKSRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHHHAQPLPAATGVRFGL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02752 301 Gene3D WRKY domain 216 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02752 301 ProSiteProfiles WRKY domain profile. 224 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02752 301 SUPERFAMILY WRKY DNA-binding domain 227 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g02752 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 291 IPR044810 GO:0003700
Phco7g02752 301 MobiDBLite consensus disorder prediction 94 120 - -
Phco7g02752 301 Pfam Plant zinc cluster domain 188 227 IPR018872 -
Phco7g02752 301 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02752 301 SMART WRKY_cls 229 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g02752 301 FunFam WRKY transcription factor 65 213 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02752 Phco-Chr7 46546849 46548061 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g02752 WRKY 2.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02752 7 46546849 46548061 Phco7g02752 7 46546849 46548061 ECH
Phco8g01859 8 19655035 19656226 Phco7g02752 7 46546849 46548061 PCT