Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02746 ATGACTCTCCGAGTACTCCAAGAAGCTTCACCCTCTAATAAGTCACAGACAACACAGCACAAATCTGGAGCATTGTTTTACATCCTCGGAGGAATTGTTGTGCTGGCCATAGTGTTGATTTTTTTATATGTATTTCGGAAGCGTATGAAACGGCCACCACAGAATATGACAGTTACAACTACAGAGAAGCAAGGGATTGGGAAACACAATGAATCAGCAGATATGATGAAGATGATATTTTCATCTAATCCACAGTCAGGGTCCATGGAGTTCTTTAGTGGGAACCTTAGGACAATTAACTGCTTTGACTACCAGTCACTGAAAAATGCAACCACGAATTTCCATGCTGATAATTTTCTTGGAAGTGGTGGATTTGGACCTGTTTACAAGGGAAAGTTGGTAGATGGAAGGCTAGTTGCGGTTAAGAAATTGTCTCTCAACAAATCCCAGCAGGGAGAAAAAGAATTTCTGATAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCATAGATGGGCCACAAAGGATACTTGTCTATGAATACATGAAAAACAGAAGTTTGGACCTCTTTATACATGAAAACAGTGATCAATTTCTGAAATGGGGAACTAGATTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCAAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGCTTCAGCCAAGGATTGGGGACTTTGGGCTGGCTAGATTTTTCCCCGAAGACCAAGCTTACCTTAGCACACAGTTCGCTGGAACACTAGGTTATACTGCTCCTGAATATGCCACTAGAGGGGAATTATCAGAAAAGGCAGATATCTATAGTTTTGGAGTACTCTTGCTTGAAATAATCTGTTGCAGGAAAAACACAGACCGCACTTTGCCATCAGAAATGCAGTACCTCCCTCAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATCATAGATCCGAAGCTGCGACAAGATGGATTCGTAGAAAAGGATGTTATGCAAGCAATCCACGTGGCTTTCTTATGTCTTCAACCTGATCCACATTTGAGGCCTCCCATGTCAGAGATTGTGGCATTGTTGACTTTCAAAATTGAAATGGTGACAACACCAATGAGGCCAGCCTTCCTGGATCGAAGACCAAGAAAGGATGATGAAAACCATTGTTTGAGAGGATTATCCGAGGGTTTAACATCTCCCATATGA 1278 0.4171 MTLRVLQEASPSNKSQTTQHKSGALFYILGGIVVLAIVLIFLYVFRKRMKRPPQNMTVTTTEKQGIGKHNESADMMKMIFSSNPQSGSMEFFSGNLRTINCFDYQSLKNATTNFHADNFLGSGGFGPVYKGKLVDGRLVAVKKLSLNKSQQGEKEFLIEVRTITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDLFIHENSDQFLKWGTRFQIILGVARGLQYLHEDSHQRIIHRDIKASNILLDDKLQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYATRGELSEKADIYSFGVLLLEIICCRKNTDRTLPSEMQYLPQYAWKLYENARILDIIDPKLRQDGFVEKDVMQAIHVAFLCLQPDPHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDDENHCLRGLSEGLTSPI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02746 425 FunFam Cysteine-rich receptor-like protein kinase 10 78 190 - -
Phco7g02746 425 SMART serkin_6 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02746 425 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 191 395 - -
Phco7g02746 425 CDD STKc_IRAK 120 386 - -
Phco7g02746 425 Gene3D Phosphorylase Kinase; domain 1 86 190 - -
Phco7g02746 425 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 409 - -
Phco7g02746 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Phco7g02746 425 Pfam Protein tyrosine and serine/threonine kinase 117 384 IPR001245 GO:0004672|GO:0006468
Phco7g02746 425 Gene3D Transferase(Phosphotransferase) domain 1 191 394 - -
Phco7g02746 425 SUPERFAMILY Protein kinase-like (PK-like) 92 388 IPR011009 -
Phco7g02746 425 ProSiteProfiles Protein kinase domain profile. 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02746 Phco-Chr7 46487777 46491524 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco7g02746 PK_Tyr_Ser-Thr 3.4e-49 CL0016