Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02737 ATGGGGGTGATTCTGCAGCTGTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCGAAGGATCTCAAGGGTCAATTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCATCCTAGTGGAGAAGCACCTGCTCCTATCCATCTTGGATTGTCATGGGGAAGCAGTCCACCAAGATCACCTTCAGATCCAAATGGGTTTGTTATATCCCCATCTCCAGAAACCATACATGTGAATCCTTCCCCCAGTGAAGCACCTGGTCTTGTGCACCCAAAAGAACCATGGAGAACCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGCCATTCTTGTCCCCTCCGGTTACATTACCACCTCCTACAGCTCCAACTCCTGAGAAGACAAAAGAATCTGAACCATCCATATCTCCTAGTCCTGGTGCAAGTACCATAACATCATCATCGCCGCCATATAGTGCTGCTCCTGGACCATCAACTGCAGAAGGGAATGTTTCACCATCCATACAACTAAGTCCACCTCAAAGCAAAACACCTGCTTTTAGTCCTCCTGTTTTCACACCAATTGCTCCAGCTCCCTTTGCAATGCCTTCAGGCAATTCACCAAAAACTTCACCAGTCAGCCAACCAATTGAACATGGAAGTTTCCCTCCTAAGATTGATGTGAGGAATAAGAGTCACAAGCCTGAGCCAGCGTTTCCAGCCGTAGTTCCAATACCTTCTACAGAGTTGCCCAAATATTCACCAGTAAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAGGGAGGGTGCTAATAATGGGCACAACCCCGAGCCAATTTCACCAGTTTGTATTAAGCCAAAAGTATGTTTTTCTAATGCATTTTCAACAGCCCCTTTAGTATTCAGTTTTCCTGAACATCCACCAGTAAGTCAGCCAACTGAACATGGAAGTTCGCCTCCAACTGTTCCCAGAGGGGATATCAACACAGGTCACACCGAGCCAGTTTCACATGCCCCAGTTGCAACATCTCCTACAAATTTGCCAAAAAATTCGCCAGTCAGTCAACCAACTCATGGAAGTTTCCCCCCTGATCTTCACAATGGAACTGCAAATAATGGTCACACTCACACACCAGCACCAAAAATGTCACTTACACCACCAAGTACATTTCCTGTAGATCCACCATTGGTCCACCCATTCATACCAGCAGCATCTCCATCCAAATCACCAGCACCTATTGTGTCTCCTGCATTGACTCCTTCCAGAAGCTTTAGTTGGAAAAAAGGTGGAGAACCAGTTTCTGCACCTGTGTACAAAACACCAAAGCCACTACTGGGTATAGTACATGACCATACTCAAGCACCTGTTGTCTCTCCTGCATTAACACCTTCTAGAAGCTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCTCCTCCATACAAAATACCAAAGCCACTTCCGGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGCACCTGAAGCAAGGCAATTTAACTATGCTCCTGAGCCATCTCCTAACAAAGATCATCCTCCTGCTTCTTCACCATCAACCACATTCTATAAGCATCACCACACAAGGAACACAATCAACAGCCCTGCTCCTGCATCGTCATATTCAGTTTCTCCTTCCACTTTAAAACACCAAGATGAACCAATTCCTCCCTCATTGCTACCAGCAAGTAGGCAAAGACATCATGCTCCATCACCATTGAGCACAGGTTCCACAGTTTCCCCGTTTGCGTTCCCTATTCAGTCACCAGTAAGCCAGATTTCACCAGCTCCTTCTCCATCATCCAAAATACTCCCCCACTCAACCAAGATTCCATTTCATCCTCCTGAAGTATCTCCTTTTCGGCCTTCTTCCAAGAGCCCTGAGAAGCCAGTCCTACCTCGTATTCAAGCACTGCCACCCCCACCTCCCAATGAAGATTGTATATCACTGGTTTGCTCAGATCCCTATACAAGTACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCAGACTTCGCCTTAGTGTTTCTTTGTATACTTTCTTCCCTTTGGTTTCAGATTTTGCTTCTGAAATTGCCATTGGGGTTTTCATGAATCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCTAACCTGCAACCTGATAAAACTATTGTATTCATTGACTTGGTACCACTTGAGGAAAAGTTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAGGTTGCTATAAAGACTTCTTACTTTGGTGATTATGACGTATTATATGTGAGCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCGTCAAGCATTACAATTGTTGATGGTGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATGATTACTATTATTTCTCTCTCAGTTTTTCTAGTGGTTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAGATCATGCAAGTAAACTGGCATCAACCCCACGTGTTCTGTCTCCTTCACTTACCAAAGCACCAGGTGCTGCTGGATCAGCAGTTGGAGGCAGGCTTGCTTCAGCTTCAACATCATTCCGGTCTAGCATTGCTGCTTATACAGGATCTGCAAAGACTTTCAGCATGAATGACATTGAGAAAGCCACCGATAATTTCCATGACTCCAGGGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTATACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGAGAGGATCATCATGGTGACCGTGAATTCCTATCTGAAGTAGAGATGCTTAACCGCCTTCACCATAGAAACTTGGTTAAATTGATTGGTATATGCACAGAGGTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGGATGGACAAGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTTGGCTCTGCTCGTGGACTGGCTTATTTGCATGAAGATTCAAGTCCTCATGTCATACATAGAGACTTCAAGTCTAGTAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCCGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGAGAACAGACACATATCAACACGTGTAATGGGAACTTTCGGTTATGTGGCTCCGGAGTATGCAATGACCGGGCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTCTTGACTGGAAGAAAACCAGTAGACATGTCACGATCTCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCATTGCTCTCAAGCGAAGAAGGAGTGGAAGCAATAATAGATCCATCTCTGGGACCTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCTGACCGTCCCTTTATGGGTGAGGTTGTTCAGGCTTTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAGCAGGCTCAAGTTCTACCTCTGTTGATTTGAGTCATTCTAGACAAGTATCAGATAATTTCCAAGGCCAATCCTCAGCCACCAATTATGATTCTGGAGTTGATATTGAAAATGGACTGTTGGCATCAGAGTTATTCAGCTCATCATCCGCGAGATATGGAAAGCTAGTGTCAGGATCATTTAGAAGACATTCTTATTCAGGTCCTCTGAGTACTGGAAGAAGCAAACGATTATGGCAGATAATTAGAAAGTTTTCTGGTGGTAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 3885 0.4486 MGVILQLLKLCVIGFVVAFEGSQGSIISPSPAFLPVIHPSGEAPAPIHLGLSWGSSPPRSPSDPNGFVISPSPETIHVNPSPSEAPGLVHPKEPWRTIAPSPQEVPNGPFLSPPVTLPPPTAPTPEKTKESEPSISPSPGASTITSSSPPYSAAPGPSTAEGNVSPSIQLSPPQSKTPAFSPPVFTPIAPAPFAMPSGNSPKTSPVSQPIEHGSFPPKIDVRNKSHKPEPAFPAVVPIPSTELPKYSPVSQPNENGSLPHREGANNGHNPEPISPVCIKPKVCFSNAFSTAPLVFSFPEHPPVSQPTEHGSSPPTVPRGDINTGHTEPVSHAPVATSPTNLPKNSPVSQPTHGSFPPDLHNGTANNGHTHTPAPKMSLTPPSTFPVDPPLVHPFIPAASPSKSPAPIVSPALTPSRSFSWKKGGEPVSAPVYKTPKPLLGIVHDHTQAPVVSPALTPSRSFNWKKGGEPVSAPPYKIPKPLPAIVHSPAQAPSAPEARQFNYAPEPSPNKDHPPASSPSTTFYKHHHTRNTINSPAPASSYSVSPSTLKHQDEPIPPSLLPASRQRHHAPSPLSTGSTVSPFAFPIQSPVSQISPAPSPSSKILPHSTKIPFHPPEVSPFRPSSKSPEKPVLPRIQALPPPPPNEDCISLVCSDPYTSTPPGAPCKCVWPMKVRLRLSVSLYTFFPLVSDFASEIAIGVFMNQSQVRIMGADAANLQPDKTIVFIDLVPLEEKFDNTTAFLTSERFWHKQVAIKTSYFGDYDVLYVSYPGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGLSKGMITIISLSVFLVVVLCFAAAWALFKFRDHASKLASTPRVLSPSLTKAPGAAGSAVGGRLASASTSFRSSIAAYTGSAKTFSMNDIEKATDNFHDSRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLNRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGMDKENSPLDWSARIKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRSPGQENLVAWARPLLSSEEGVEAIIDPSLGPDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSTSVDLSHSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSSSARYGKLVSGSFRRHSYSGPLSTGRSKRLWQIIRKFSGGSVSEHGTMFKL 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02737 1294 SUPERFAMILY Protein kinase-like (PK-like) 891 1184 IPR011009 -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 299 381 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 305 319 - -
Phco7g02737 1294 FunFam receptor-like serine/threonine-protein kinase ALE2 884 986 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 329 377 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 1199 1223 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 106 126 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 246 272 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 246 262 - -
Phco7g02737 1294 Gene3D Phosphorylase Kinase; domain 1 883 986 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 514 551 - -
Phco7g02737 1294 Pfam Protein tyrosine and serine/threonine kinase 914 1184 IPR001245 GO:0004672|GO:0006468
Phco7g02737 1294 ProSitePatterns Protein kinases ATP-binding region signature. 917 939 IPR017441 GO:0005524
Phco7g02737 1294 CDD STKc_IRAK 917 1185 - -
Phco7g02737 1294 FunFam Receptor-like serine/threonine-protein kinase ALE2 987 1204 - -
Phco7g02737 1294 PANTHER OS01G0750732 PROTEIN 639 1211 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 54 184 - -
Phco7g02737 1294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1033 1045 IPR008271 GO:0004672|GO:0006468
Phco7g02737 1294 MobiDBLite consensus disorder prediction 481 580 - -
Phco7g02737 1294 ProSiteProfiles Protein kinase domain profile. 911 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02737 1294 MobiDBLite consensus disorder prediction 55 79 - -
Phco7g02737 1294 Gene3D Transferase(Phosphotransferase) domain 1 987 1210 - -
Phco7g02737 1294 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02737 Phco-Chr7 46377240 46386943 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phco7g02737 PK_Tyr_Ser-Thr 3.3e-49 CL0016