Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02721 ATGGAACCTCGCGTTGGGAATAAGTTTCGGCTTGGCCGTAAGATCGGTAGCGGATCGTTTGGAGAGATCTATTTAGGTACTAACATTCAAAATAACGAAGAGGTTGCAGTTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTATATGAATCCAAGTTGTACAGAGTTCTCCAGGGAGGAACTGGAATTCCAGATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGCCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTGTAAATCTTTTCTACATCGGGATATCAAACCAGATAATTTCCTTATGGGATTGGGAAGGCGGGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCAAAGAAATATAGGGATAGTTCAACTCATCAACACATTCCATACAGAGAAAATAAGAATTTAACTGGGACTGCTAGATATGCAAGTATGAATACCCACCTTGGCATTGAGCAGAGTCGAAGAGATGATTTGGAGTCTCTAGGTTATGTCTTGATCTATTTCCTGAGGGGAAGTCTCCCTTGGCAAGGACTTAAAGCGGGAACCAAGAAACAGAAATACGAGAGAATCAGTGAAAAAAAGGTTTCTACTTCTATTGAGGCATTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTATTGTCGTTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAGAGAATATTTCGTGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTAGCCGCGCCTCCTGCACGTGCTCTTGGTCCTACTGCTGGAACTAGTTCTGCAATGCCACCAGCTGTGACTAATGCTGATAGACAAACAGGAGAGGAAGAAGGACGACCTCCTGGTCTGATTTCAGGGGATTCCACAAGGAGAAGAATGTCAGGGACCGTCTCAAACTCTGTAAATATTTCAAGACAGAAAAATCCAGTCACCATGGATGCTGCTCTTAATAAGGAAGCCATGTTATCAAAGCCTAATGTCTTGGGTCAGTCAAGTGGATCAAGGCGAGCTGCTGTTTCTAGTAGCCGCGATGCATTTGCTGGTAGTGATTTGGATTCTCGTACTCGTACTACTGAGGCTAACCCTGGAACAGTGCGCAAAATATCATCTGGGAGAAATGCTTCTTATGTCAGGAACTACGAAAGTGCTGTCAAGGGCATTGAAGGTTTGCAATTGGAAAATGACAAGAGGGCACATTATTAA 1371 0.4223 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQNNEEVAVKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHCKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLIYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARALGPTAGTSSAMPPAVTNADRQTGEEEGRPPGLISGDSTRRRMSGTVSNSVNISRQKNPVTMDAALNKEAMLSKPNVLGQSSGSRRAAVSSSRDAFAGSDLDSRTRTTEANPGTVRKISSGRNASYVRNYESAVKGIEGLQLENDKRAHY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02721 456 Gene3D Transferase(Phosphotransferase) domain 1 1 317 - -
Phco7g02721 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Phco7g02721 456 FunFam Casein kinase I isoform delta-like 1 308 - -
Phco7g02721 456 MobiDBLite consensus disorder prediction 402 428 - -
Phco7g02721 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco7g02721 456 FunFam Putative Casein kinase I 1 85 - -
Phco7g02721 456 PANTHER CASEIN KINASE-RELATED 9 369 - -
Phco7g02721 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Phco7g02721 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phco7g02721 456 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02721 456 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02721 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02721 456 MobiDBLite consensus disorder prediction 305 356 - -
Phco7g02721 456 MobiDBLite consensus disorder prediction 382 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02721 Phco-Chr7 46183882 46191355 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phco7g02721 Pkinase 8.9e-26 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02721 7 46183882 46191355 Phco7g02721 7 46183882 46191355 ECH
Phco8g01901 8 20086791 20091922 Phco7g02721 7 46183882 46191355 PCT