Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02718 ATGTATTGGAATAAGGTTCCAACTCACTTTCTCTCAAAACGCATTGTCCTCTCTTTCTGCGGCGTAGATCTGAGCAGTTTGGGAAACCCTAACTGCTCTCACCAACGACCTCACTACTCTCTTCGCCTTTTTCTCCTCCGATCAACGACCTCTTTCTTCGCCCTAAGGTTGCTCTCTCTTCTTCTCTCTTCTCCGATTGGATGCCATCACTCTCTTTTCAATTCTCTTAGTTTCAACCGATGTAGTTCTTATCGCGATTTTACGATTGGATCTGCTTATGCTGTTCTGATCGACAGTAAATTGATGTTAAACTGTTTCCTTAAAACTTGTTTGGGAGTTGTAAATAGAATGACTTCTGGAGTAGGACTACATTTCATGGCAGGACTTGCACCCGAGGGATCACAGTTTGATGGTCGTCACTATGATAGCAAAATGAATGAGTTGCTTACAACTGATGCACAGGATTTCTTCACATCCTACGACGAGGTTTATGAAAGTTTTGATGCTATGGGTTTGCAAGAGAATCTTCTGAGAGGCATTTATGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTCTGCAAGGGACTTGATGTTATACAACAGGCTCAGTCTGGAACTGGAAAGACAGCAACTTTCTGTTCTGGGATTCTTCAGCAACTTGATTATAATGTGACAGAATGCCAAGCCTTGGTTTTAGCACCAACTCGGGAGCTTGCTCAGCAGATTGAGAAAGTTATGCGGGCACTTGGAGATTATCTTGGAGTTAAGGTGCATGCATGTGTTGGAGGTACCAGTGTTCGTGAAGACCAACGCATTCTATCAAGTGGTGTTCATGTGGTTGTTGGTACTCCAGGTCGAGTATTTGATATGCTACGCAGACAGTCACTTCGACCGGATTACATCAAGATGTTTGTATTGGATGAGGCTGATGAAATGCTTTCCCGAGGTTTTAAAGATCAGATCTATGATATATTCCAGCTGCTTCCAAGTAAGATTCAAGTGGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCACTCGAGATCACCAGGAAATTTATGAACAAACCTGTGAGGATCCTCGTGAAGCGAGATGAGCTCACCTTAGAGGGTATCAAGCAGTTTTATGTCAATGTTGAGAAAGAGGAATGGAAGCTTGACACTCTCTGTGATCTTTATGAGACATTGGCAATTACTCAAAGTGTCATTTTCGTGAACACCAGAAGAAAGGTTGATTGGCTGACTGACAAGATGCGCAGCCGAGATCACACAGTCTCCGCAACCCATGGAGACATGGACCAGAATACCAGAGACATTATTATGCGTGAATTCCGCTCCGGGTCTTCCCGTGTTTTGATAACTACTGATCTTTTGGCCCGTGGTATTGATGTCCAGCAAGTGTCTTTAGTTATAAATTACGATCTCCCAACACAGCCTGAGAACTATCTCCATCGTATTGGTCGTAGTGGGAGGTTTGGCAGGAAAGGTGTTGCCATCAATTTTGTCACAAAGGATGATGACAAAATGCTGTTTGACATTCAGAAGTTTTACAATGTGGTAGTTGAGGAGCTGCCTTCAAATGTTGCCGAACTTCTTTGA 1617 0.4335 MYWNKVPTHFLSKRIVLSFCGVDLSSLGNPNCSHQRPHYSLRLFLLRSTTSFFALRLLSLLLSSPIGCHHSLFNSLSFNRCSSYRDFTIGSAYAVLIDSKLMLNCFLKTCLGVVNRMTSGVGLHFMAGLAPEGSQFDGRHYDSKMNELLTTDAQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDDKMLFDIQKFYNVVVEELPSNVAELL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02718 538 SMART helicmild6 418 499 IPR001650 -
Phco7g02718 538 Pfam DEAD/DEAH box helicase 190 351 IPR011545 GO:0003676|GO:0005524
Phco7g02718 538 Gene3D - 374 538 IPR027417 -
Phco7g02718 538 FunFam Eukaryotic initiation factor 4A-II 153 372 - -
Phco7g02718 538 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 377 538 IPR001650 -
Phco7g02718 538 PANTHER RNA HELICASE 152 522 - -
Phco7g02718 538 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 196 366 IPR014001 -
Phco7g02718 538 CDD SF2_C_DEAD 378 508 - -
Phco7g02718 538 FunFam Eukaryotic initiation factor 4A-III 373 538 - -
Phco7g02718 538 Gene3D - 155 373 IPR027417 -
Phco7g02718 538 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 312 320 IPR000629 -
Phco7g02718 538 Pfam Helicase conserved C-terminal domain 391 499 IPR001650 -
Phco7g02718 538 CDD DEADc_EIF4A 169 367 - -
Phco7g02718 538 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 165 193 IPR014014 GO:0003724
Phco7g02718 538 SMART ultradead3 184 381 IPR014001 -
Phco7g02718 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 519 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02718 Phco-Chr7 46159650 46166370 Dispersed/Wgd