Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02715 ATGGAGTGCGTTGCAGCGAGAAACTTGGCGGCAATGGCGTTTTGCCTGAGTCCTTCGTCGAGGTTGAGGTTGCGGAGGAAGAACCTGTGGAGAAGACGAACCGCCTGGGGCGGCCACGACGTTCGGTGGCGCTCGCGGTGGCTGAAGGCGGAGGCGAAGGCAGGGAGCGAGAGTTGCGTGGCGACCAAAGAAAATTTTGCCGATGACGAGGATTACGTGAAGGCCGGTGGCTCCGAGCTCGTTTTCGTACAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGTGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCAGCTGAATCGGCCAAGTTGGGACTAAAAGTTGGGCTTATTGGTCCGGATCTTCCTTTTACCAATAATTATGGTGTGTGGGAGGACGAATTTAGAGGTCTCGGACTTGAAGGTTGCATTGAACATGTTTGGAAGGATACCATTATCTATCTCGACAATAAGGACCCCGTTTTTATTGGACGTTCCTATGGACGCGTCAGTCGGCATCTGCTTCACGAGGAATTGTTAAGCAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTGTTATTGAGGCGAGCAATGGTCACAGTCGTATTGTCTGTGAATATGATATTGTAGTGCCCAGCAGGCTTGTTACTGTTGCCTCAGGAGCTGCTTCGGGGAAACTGTTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTTCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGGAGAAAAATGTTCAAGGTCTAGAAGCAAATTATCCAACATTTCTGTATGCAATGCCCATGTCCCGTACAAGAGTGTTTTTTGAGGAAACCTGTTTAGCGTCAAAAGACGCGATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCTAGATTAAATTCAATGGGGATCAGAATTACTAAAACTTACGAAGAGGAATGGTCTTATATCCCAGTTGGCGGATCCTTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCCGCCAGCATGGTGCATCCAGCCACAGGCTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATAGCTACTATTTTGAAAGATGGCCATGCCAAGGACATTATTACCCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAACACACTGTGGCCACAAGAAAGGAAACGGCAGAGGGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATTGGGGGAATTCGAACATTCTTTCGTACTTTCTTCTGCCTACCTGACTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCCTCTACAGATCTTGTATTATTTGCTTTCTACATGTTCATAATAGCACCAAATAACTTGAGAATGTCTCTAGTCAGACATCTGCTTTCAGATCCTACGGGTGCAACGATGATAAAGACTTACTTAGCGGTATAG 1593 0.4601 MECVAARNLAAMAFCLSPSSRLRLRRKNLWRRRTAWGGHDVRWRSRWLKAEAKAGSESCVATKENFADDEDYVKAGGSELVFVQMQQNKAMEMQSKLVDKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFRGLGLEGCIEHVWKDTIIYLDNKDPVFIGRSYGRVSRHLLHEELLSRCVESGVSYLSSRVESVIEASNGHSRIVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMEKNVQGLEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNSMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIGGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMSLVRHLLSDPTGATMIKTYLAV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02715 530 NCBIfam lycopene cyclase family protein 110 510 IPR010108 GO:0016117|GO:0016705
Phco7g02715 530 PRINTS Pyridine nucleotide disulphide reductase class-I signature 110 132 - -
Phco7g02715 530 PRINTS Pyridine nucleotide disulphide reductase class-I signature 240 249 - -
Phco7g02715 530 Pfam Lycopene cyclase protein 110 507 - -
Phco7g02715 530 Gene3D - 109 452 IPR036188 -
Phco7g02715 530 PANTHER - 40 528 - -
Phco7g02715 530 SUPERFAMILY FAD/NAD(P)-binding domain 108 503 IPR036188 -
Phco7g02715 530 FunFam lycopene epsilon cyclase, chloroplastic 106 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02715 Phco-Chr7 46120548 46130659 Dispersed