Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02710 ATGATCATGAAGAAAGGGAGCTTCAACTCTGGTCTCAAACTCACTGTTCCTGCATCTGATTGGGGTTCATTTACCCAGTTTTTGTCTGAGTCTGAAAGTGAAACGTTCAAGGCAGGGGACTTGCTTGTCAACAAGGAAGGAGTTCGAGTTGTTTCTGAAAAGGAAGTGGAAGCTCCACCACCAATCACGCCACTAGACAACCAGTTGAACCTGGCAGATATAGATACAATAAAAGTGATTGGAAAAGGAAATGGAGGGATAGTGCAATTGGTGCATCACAAATGGACTAATCAATTTTTTGCATTGAAGGAAATTCAGATGAATATTGAGGAGCCTATTCGCAGGCAGATAGCACAAGAGCTAAAAATCAATCAATCAGCACAATGTCCTTATGTTGTTATCTGCTATCAATCATTCTATCATAATGGTGTCATATCAATCATATTAGAGTACATGGACGGAGGGTCCTTAGAAGATTTTCTGAACAAAGTTAAAACAATTCCAGAGTCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGCTTAATGTATCTTCACCATGAAAAATACATTATCCACAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGGTAAAGATTACTGACTTTGGTGTAAGCATAATCCTGGAAAATACATCTGGTCAAGCAAATACTTTCATTGGCACACACAGCTATATGTCTCCAGAGAGAATCGCTGGTAACCAGAATGGCTACGACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTGCTCAAGTGTGCCACAGGGCAGTTTCCATATGCACCACCAGATCAACGTGAAGGATGGGAAAATCTTTTCCAGCTAATTGAAATCATTGTGGAAAAACCTTCCCCCACTGTCCCATCAGATGATTTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAAGGGATAGACCGTCTGCTCGGGACCTTATAAACCATCCTTTTATCAACTTGTATGAGGACTTGAATGTGGATCTTTCAGCCTATTTCTCCAACGCAGGATCTACACTTGCAACTATATAG 1083 0.4054 MIMKKGSFNSGLKLTVPASDWGSFTQFLSESESETFKAGDLLVNKEGVRVVSEKEVEAPPPITPLDNQLNLADIDTIKVIGKGNGGIVQLVHHKWTNQFFALKEIQMNIEEPIRRQIAQELKINQSAQCPYVVICYQSFYHNGVISIILEYMDGGSLEDFLNKVKTIPESYLAAICKQVLKGLMYLHHEKYIIHRDLKPSNLLINHRGEVKITDFGVSIILENTSGQANTFIGTHSYMSPERIAGNQNGYDYKSDIWSLGLILLKCATGQFPYAPPDQREGWENLFQLIEIIVEKPSPTVPSDDFSPEFCSFISACLQKNPRDRPSARDLINHPFINLYEDLNVDLSAYFSNAGSTLATI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02710 360 Gene3D Phosphorylase Kinase; domain 1 49 153 - -
Phco7g02710 360 SMART serkin_6 74 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02710 360 CDD PKc_MAPKK_plant_like 72 340 - -
Phco7g02710 360 Pfam Protein kinase domain 76 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02710 360 ProSiteProfiles Protein kinase domain profile. 74 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02710 360 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Phco7g02710 360 FunFam Mitogen-activated protein kinase kinase 6 155 355 - -
Phco7g02710 360 SUPERFAMILY Protein kinase-like (PK-like) 72 342 IPR011009 -
Phco7g02710 360 FunFam Mitogen-activated protein kinase kinase 6 44 153 - -
Phco7g02710 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 23 338 - -
Phco7g02710 360 Gene3D Transferase(Phosphotransferase) domain 1 154 357 - -
Phco7g02710 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02710 Phco-Chr7 46069143 46073630 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco7g02710 Pkinase 2.1e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02710 7 46069143 46073630 Phco7g02710 7 46069143 46073630 ECH
Phco8g01912 8 20201381 20205645 Phco7g02710 7 46069143 46073630 PCT