Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02692 ATGGAAAGCAAGAACTGTTGTGAAAAAGAAGGAGCATGGTCTTCTGAAGAAGACCAAATTCTCTTCAACTGTGTTCAACTCAGTGGAGAAGGAAATTGGAGAGACCTTCCCCAAAGAGCTGGGTTGAAACGATGTGGTGAGAGTTGCAAACATCGATGGCTGAACTATCTGAAGCCAACCATCCCCACAGAGAACTTTTCTTGGGATGAGCAAGAACTCATAATCAGACTGCATAAGCTCCTGGGGAATAGATGGTCTATGATTGCTGGAAGATTACCAGGACGCAGTGAAGATGAGATCAAGAACTTCTGGAGTACCTATTTGAGCAAGAGCAAGAGCAAGGAGATAGAACAGAAGCAGCAAAACAAGAATAAACTTCCAAGCACAAGCATGTCCAGTGTTGAATCTCCATGGTGCTCCCAAAATTACCTTAATATGAATTCCATGGAGTCTCCCAACCCTTCCATAGTTAGACCTAAAGTTGTTAGGTTAACTAAGGTTGTGGTGCCAAGACAGGTAGCCAATGGAAAATGCAATGAATTTACCTCAACATCAATTTCATAA 564 0.4238 MESKNCCEKEGAWSSEEDQILFNCVQLSGEGNWRDLPQRAGLKRCGESCKHRWLNYLKPTIPTENFSWDEQELIIRLHKLLGNRWSMIAGRLPGRSEDEIKNFWSTYLSKSKSKEIEQKQQNKNKLPSTSMSSVESPWCSQNYLNMNSMESPNPSIVRPKVVRLTKVVVPRQVANGKCNEFTSTSIS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02692 187 Gene3D - 10 62 - -
Phco7g02692 187 MobiDBLite consensus disorder prediction 122 136 - -
Phco7g02692 187 CDD SANT 65 108 IPR001005 -
Phco7g02692 187 CDD SANT 12 57 IPR001005 -
Phco7g02692 187 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 132 - -
Phco7g02692 187 MobiDBLite consensus disorder prediction 114 136 - -
Phco7g02692 187 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Phco7g02692 187 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Phco7g02692 187 SMART sant 62 110 IPR001005 -
Phco7g02692 187 SMART sant 9 59 IPR001005 -
Phco7g02692 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Phco7g02692 187 Gene3D - 64 133 - -
Phco7g02692 187 SUPERFAMILY Homeodomain-like 10 104 IPR009057 -
Phco7g02692 187 FunFam MYB-related transcription factor 9 62 - -
Phco7g02692 187 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Phco7g02692 187 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Phco7g02692 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02692 Phco-Chr7 45914115 45916415 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g02692 Myb_DNA-binding 2.5e-13 CL0123