Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02690 ATGTCTGGTTTTCTACGTTTGGAAAATGAAGAAAAGGTGAAAAAGTTGAGTGGGGGGTTTCTGGGGTGTGAGATGTGTCAGAGACAAGAGCTGCCAGAGAGACAGCTTAGCTGCACAACCAGCAGCAGCAGCATCAGAGCAGCAGTAGCATCAGAGACAGAGAGGAACAGGTTTCCCTTCACCCCATCCCAGTGGCAAGAGCTTGAACATCAAGCTCTCATCTACAAGTACATGGCTTCAGGAATTTCCATTCCACCTGATCTTCTCTTCACAATAAAAAGGAGCTACTTTGATTCCCCTCTGTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTACCTACAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGTAGGTGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCCAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACAACAAACACAAATGCTTCAACTCAACAACCAGTCTCATCAATCACCAAACTTAATACTGTCAATACTCTTTCTCCTCTTGCATCATCTGAAACACACCAACACCACCCTCCACACTATGGCTCCTTTCTCTATCAGCACCCTCCATCAAGGTCCTCTGGCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAATCCAACACAGATTGCAGGAGTAGGTATACTTACGGAGAGAAAGAAGAGGTTGATGAGCATGCTTTCTTCACAGAGCCATGTGGTATCATGAAAAGCTTTTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCATTGACTATGAGCTCCTCTTCTTCTTCCAACAAACAGAGGAGTTCCTTTGGCTTGTCCAATGATTATTCTTGCTTGCAACTTCAGAGCCACTCAAAGCTGCAAGAGCAACAAGATCAGGGTGGTTGCTACATGCTAGGTGGAGGCCAACTTGGAAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTTGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAACTTTCAATTTCCATTCCCACCTCTTCTCATGATTTTCCAGCCTTCAGTTCCAGAACCCACCGTGATGGTTGA 1221 0.4562 MSGFLRLENEEKVKKLSGGFLGCEMCQRQELPERQLSCTTSSSSIRAAVASETERNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTNTNASTQQPVSSITKLNTVNTLSPLASSETHQHHPPHYGSFLYQHPPSRSSGIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYTYGEKEEVDEHAFFTEPCGIMKSFSASSMDDSWQLTPLTMSSSSSSNKQRSSFGLSNDYSCLQLQSHSKLQEQQDQGGCYMLGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHRDG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02690 406 Pfam WRC 128 170 IPR014977 -
Phco7g02690 406 PANTHER GROWTH-REGULATING FACTOR 5 40 394 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phco7g02690 406 ProSiteProfiles QLQ domain profile. 59 94 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco7g02690 406 MobiDBLite consensus disorder prediction 386 406 - -
Phco7g02690 406 Pfam QLQ 59 92 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco7g02690 406 ProSiteProfiles WRC domain profile. 127 171 IPR014977 -
Phco7g02690 406 SMART QLQ_2 58 94 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02690 Phco-Chr7 45880009 45882355 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phco7g02690 WRC 8.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02690 7 45880009 45882355 Phco7g02690 7 45880009 45882355 ECH
Phco8g01938 8 20530255 20532172 Phco7g02690 7 45880009 45882355 PCT