Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02680 ATGACCCTCATGAAAATGATATGGAAATCCATCTTCCCCGGTTGTTACAAGGGTGAGTATCCCTCTCCGAAGCCAAAGAAGGTGGTGGCTACAAAGCCAAATTCTTCTCACAGGATTTCTGTGACGGATTTGAGTTATCCAACCACGACTCTTTCAGAGGATCTCTCCATTTCTCTAGCGGGGACTAACCTGCATGTTTTCTCACTTGCCGAGCTCAAGATCATCACGCAGTCTTTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAAGGGTTCATTGATGACAAGCTTAGGCATGGCCTTAAGGCTCAACCCGTGGCTGTTAAGCTCTTAGACCTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTAAGGCATCCACATCTGGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGACTTTTGGTATATGAATATTTACCAAGAGGCAGCTTGGAGAATCAATTATTTAGAAGATTCACAGCATCACTAGCATGGTCAACGAGAATGAAAATTGCTGTTGGGGCTGCCAAGGGTCTAGCTTTTCTTCATGAAGCCGAGAAGCCGGTCATTTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTAATGGGCACACATGGATACGCAGCACCAGAATATGTCATGACAGGTCACTTAACATCAATGAGTGATGTGTATAGTTTTGGGGTAGTGCTGTTGGAGCTGCTAACAGGGAGGAGGTCAGTGGACAAGAATCGTCCTCCAAGGGAACAGAACCTAGTGGAGTGGGCAAGGCCAATGTTGAATGATTCAAGGAAACTCAGTAGGATAATGGACCCTAGACTTGAAGGGCAATATTCTGAGATGGGGACCAAAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCACAGGCCTAGGAGCAGACCCTCAATGAGCACAGTGGTTAAGACCCTTGAGCCACTTCAGGATTTTGATGACATTCCTATTGGAACATTTGTTTACACTGCTCCACCAAACAATGAAGTGCAGAATAGGGATGCAAAGGATCAATTTGAAGCACCTAGAAGGAGGGAAAATAGCAATGGCCAACACCATCACAGGAACCACCACCATCTTAACAGGCATCATCCTCTGAAGTCCCCCAAGAGCCCAAAGCCACAATCACAGACACATTTAGGTTCAGTGAATGATCACAACAAACATAGAAATGGTAGAGGAAGTGGATCAAACTCTCCTCCATCACATGTTAAAAGGCCAGGAATCATTGCCTAA 1386 0.456 MTLMKMIWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPTTTLSEDLSISLAGTNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLAWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGHLTSMSDVYSFGVVLLELLTGRRSVDKNRPPREQNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPNNEVQNRDAKDQFEAPRRRENSNGQHHHRNHHHLNRHHPLKSPKSPKPQSQTHLGSVNDHNKHRNGRGSGSNSPPSHVKRPGIIA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02680 461 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02680 461 CDD STKc_IRAK 85 359 - -
Phco7g02680 461 MobiDBLite consensus disorder prediction 383 397 - -
Phco7g02680 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Phco7g02680 461 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Phco7g02680 461 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Phco7g02680 461 PANTHER OS01G0588500 PROTEIN-RELATED 45 360 - -
Phco7g02680 461 MobiDBLite consensus disorder prediction 373 461 - -
Phco7g02680 461 FunFam Probable serine/threonine-protein kinase PBL8 162 374 - -
Phco7g02680 461 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Phco7g02680 461 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Phco7g02680 461 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Phco7g02680 461 MobiDBLite consensus disorder prediction 398 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02680 Phco-Chr7 45767832 45770169 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco7g02680 PK_Tyr_Ser-Thr 4.6e-47 CL0016