Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02667 ATGGCCGCTGTTCGCCTCCACCACCTCCTCCTCCTCCTCTTCCTCTCCTTCCTCTTCTCGCTCTCTTCTTCAACCGAAACCCAATCCCTCCTCCGTCTCAAGCAATCCCTCGCCAACGCCGATCGCTCTCTCTCCTCATGGATCCCCAACGTCTCGCCTTGCTCCGGTACATGGCTCGGCGTTGTCTGCTTCAACGGCGTCATCACGGGCCTGCACCTCTCCGACTTGGGCCTCTCGGGCCCAATCGACGTCAACGCCCTGGCCGAGATTCGCGGCCTTAGAACCCTCAGCTTCATCAACAACTCCTTCTCGGGGCCAATGCCGGAGTTCAACAAACTGGGCTCAATCAAGTCCCTCCTTTTAACCCAAAACCGTTTCCACGGACCCATCCCAAACGACTTTTTCTCCCCGTTGAAATCCCTCAAGAAACTCTGGCTCTCCGGCAACCGCTTCTCCGGCACCATCCCCCAATCCCTAACCAGGCTCGAGCTTCTCAAAGAGCTCCACCTCGAATACAACTCCTTCTCCGGCCAAATCCCCAACTTCGGCCAAGGGCTAAAATCGCTGGATCTGTCCTTCAACAAACTCGAAGGACCCATTCCCGAGAATCTGGCGACGTTCACCGTGGACTCTTTCGTAGGAAACGACGGTCTGTGCGGGAAGCCGTTGGTGAAGGCGTGCGAGACTTCCACCACGTCGTACTCGATGGCGAGCAACGTGGGAGAGGAGGAGTACGGGAACAACTGGGCGAGGAAGGTAATCGTGGTGCTAATGCTGGCGGTAGTGGCGGCGTTGATGTTTCTGTTTTTGACGAAGAAGCGGCGGGGGCAGTTCACTGCGGTGAGCCGGAGCAGTAGCGCGGAGGAGGAGGTTAGGGAGGTGCAGGTGTCGAGCGTGAGGGGGAGCGTGGGCGAGAGGAGGGAGAACAAGAGGGGGGACATAGTGATGGTGAACGAGATGAGGGGGGTGTTTGCGCTGCAAGACATGATGAAGGCAGAGGCGGAGGTGCTGGGGAACGGGGCTCTGGGGTCGACGTACAAGGCGGCGATGGCGAACGGCCTGTGCGTGGTTGTGAAGAGGATGAGGGAGATGAATAAGATGGGGAAGGAAGTCTTTGACGCCGAGATGAGGCAGTTCGGCAGGATACGACACCGTAACGTCATCAGTCCCCTCGCCTACCACTACCGTAGGGAGGAGAAGCTCTTGATCACCGAGTACATGCCCAAAGGAAGCTTGTTCTATGTCTTGCATGGTGACAGAGGATTATCTCATTCTAAATTGACATGGCCTACCCGTTTGAACATCGTTAAGGGAATTGCAAGAGGGTTGAGTTTTCTTTACACTGAATTTTCCACCTACGACTTGCCTCACGGGAACCTTAAGTCTTGCAATGTTCTCCTAAGTGATGACTATGAGCCTCTCTTGAGCGACTATGCCTTTCAGCCACTAATCAACCCCAGTGTTGCAGTGCAGTCATTGTTTGCCTTCAAATCCCCAGACTATGTGCAGAACCAGAAAATTTCACAGAAGACCGATGTTTACTGCCTCGGAATCATCATTCTTGAAGTCATCACAGGGAAGTTTCCTGCCCAGTATCACAGCAATGGCAAGGGTGGGACTGATGTTGTGCAATGGGCCCATTCTGCTGTTTCTGAGAGAATAGAAGCAGAGTTGATCGATCCAGAGTTGTCAAACGACACAAATTCACGCAATCAGATGCTGCAACTTGTCCATATCGGGGTTGCTTGCACCGAAAATAACCCTGATCAAAGACCAAAGATGAAAGAAGCTATTAGAAGGATAGAAGAGGCTTTGAGGGTGGGAATGTTCTTGATCCTTTGCTCGTCCAATTTCATTAATGATCTTCTTAGAGTAAAGTGGTATGCACTAAACAGTGATTTTCTGCAAGAGAAAATAGAGAACAAAGAAGAATGCGGATAG 1941 0.5265 MAAVRLHHLLLLLFLSFLFSLSSSTETQSLLRLKQSLANADRSLSSWIPNVSPCSGTWLGVVCFNGVITGLHLSDLGLSGPIDVNALAEIRGLRTLSFINNSFSGPMPEFNKLGSIKSLLLTQNRFHGPIPNDFFSPLKSLKKLWLSGNRFSGTIPQSLTRLELLKELHLEYNSFSGQIPNFGQGLKSLDLSFNKLEGPIPENLATFTVDSFVGNDGLCGKPLVKACETSTTSYSMASNVGEEEYGNNWARKVIVVLMLAVVAALMFLFLTKKRRGQFTAVSRSSSAEEEVREVQVSSVRGSVGERRENKRGDIVMVNEMRGVFALQDMMKAEAEVLGNGALGSTYKAAMANGLCVVVKRMREMNKMGKEVFDAEMRQFGRIRHRNVISPLAYHYRREEKLLITEYMPKGSLFYVLHGDRGLSHSKLTWPTRLNIVKGIARGLSFLYTEFSTYDLPHGNLKSCNVLLSDDYEPLLSDYAFQPLINPSVAVQSLFAFKSPDYVQNQKISQKTDVYCLGIIILEVITGKFPAQYHSNGKGGTDVVQWAHSAVSERIEAELIDPELSNDTNSRNQMLQLVHIGVACTENNPDQRPKMKEAIRRIEEALRVGMFLILCSSNFINDLLRVKWYALNSDFLQEKIENKEECG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02667 646 ProSiteProfiles Protein kinase domain profile. 331 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02667 646 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Phco7g02667 646 Gene3D Transferase(Phosphotransferase) domain 1 407 608 - -
Phco7g02667 646 Gene3D Ribonuclease Inhibitor 134 184 IPR032675 -
Phco7g02667 646 Gene3D Ribonuclease Inhibitor 25 133 IPR032675 -
Phco7g02667 646 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02667 646 SUPERFAMILY L domain-like 25 211 - -
Phco7g02667 646 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Phco7g02667 646 Gene3D Phosphorylase Kinase; domain 1 299 406 - -
Phco7g02667 646 FunFam Nuclear pore complex protein NUP107 23 181 - -
Phco7g02667 646 SUPERFAMILY Protein kinase-like (PK-like) 335 603 IPR011009 -
Phco7g02667 646 Gene3D Ribonuclease Inhibitor 185 230 IPR032675 -
Phco7g02667 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 605 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02667 Phco-Chr7 45631851 45634052 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco7g02667 Pkinase 1.7e-26 CL0016