Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02664 ATGAAGGGGAGACAAAGATTATCATTACATCTTAGGACTCTCTCTTCTTTTGTAAAGCAACAACCCTCACCGTCAAACCACGCGTTCTCTTCCTCTCTCTCACCGAATACCTGTGTTCTTCTTTGTGGGTACTTTCAATTCATCATGTCCAGCTCGTCGGAGTACTCTGAATTTTCCGGCCAGAAACCGGCCAAGTCCCCGGAGAAGTCGAGCTTCTCTCAAACTTGCAGTCTATTGAGTCAATACATCAAGGAGAAGGGTAGCTTTGGAGATCTCACCCTCGGCATGACATGCAACACCGAACCATGTGGGTCACCTGAGACGTCATGTCAATCTGGTACAACTATGAACTTGTTTCCTACAAAGGAAAACAACGTGACACCAAAGAACCTGACAGCCATGGATTTGCTCTCTCCACAAGCTTCCTATCGTCCTTTAGAGGAGATTCCAACCTTGGTCAATTCCAGTGCAATTAAGTCTGTGAGCAAGGTTAACAAAACTGCACAGATGACAATCTTTTATGGTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGAGAAAGCAAATGAGATCATGTCCTATGCCAGAGGGAAACCACAGAGCCAGAACAATTCTGTTTTCACTTACACACAGAGCCAGCCTTCATTTCCTCCTAATTTGGTCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCTCTGTGAATGTTACAAACTCCATCCATGAACACTCTCAAGCATCATCCAGGCCTGTTGTTTGTGATCCGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGTTGAAGAGAAAGGATAGAATTGCCTCCAAAGCTCCATATCAAGTAACAAACGGGCCTTCAGCTGAGCCCATGCCATGGCTTGGGTTGAGTGCTACATCACCTAAAATCTGA 918 0.4499 MKGRQRLSLHLRTLSSFVKQQPSPSNHAFSSSLSPNTCVLLCGYFQFIMSSSSEYSEFSGQKPAKSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCNTEPCGSPETSCQSGTTMNLFPTKENNVTPKNLTAMDLLSPQASYRPLEEIPTLVNSSAIKSVSKVNKTAQMTIFYGGQVVVFDDFPAEKANEIMSYARGKPQSQNNSVFTYTQSQPSFPPNLVRTSADSSAPIIPSVNVTNSIHEHSQASSRPVVCDPPIARKASLHRFLLKRKDRIASKAPYQVTNGPSAEPMPWLGLSATSPKI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02664 305 Pfam tify domain 166 196 IPR010399 -
Phco7g02664 305 SMART tify_2 163 198 IPR010399 -
Phco7g02664 305 ProSiteProfiles Tify domain profile. 163 198 IPR010399 -
Phco7g02664 305 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 64 288 IPR040390 -
Phco7g02664 305 MobiDBLite consensus disorder prediction 280 305 - -
Phco7g02664 305 Pfam Jas motif 258 283 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02664 Phco-Chr7 45597175 45599269 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco7g02664 tify 9.3e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02664 7 45597175 45599269 Phco7g02664 7 45597175 45599269 ECH
Phco8g01965 8 20873508 20875377 Phco7g02664 7 45597175 45599269 PCT