Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02661 ATGGTGAAGCCTGGTGGCGTGGAAAAATCTACGGAGGAGCGAAGCAGTACACCGTACAGAGGAGTACGGAAGAGGAAGTGGGGAAAATACGTGTCGGAAATTAGGCTGCCCAACAGCCGTCAAAGGATTTGGTTGGGCTCCTACGACAGCGCCGAGAAGGCGGCGCGTGCGTTCGATGCGGCCATGTTCTGTTTACGTGGCAGCGGCGCCAAATTTAACTTCCCGAGTGATCCGCCCAACATTGCCGGCGGGAGCACCATGACCCCCTCTCAGATTCAGATCGCTGCGGCCCATTTCGCCAATTCGGAGCCCCAGACAGAGTGTTCGGGTCAGCAACTCGTGGAGTCTTTAGCTTCGGACGAGGAAACGGCGTCGTTGAGGTTGGAGTCGTCGTCTCCTCCTCTCCCCGACGTGTCAGTTCAGAACGACGCCATATTCCAAAACGGGTCATTTCCCGACCCGTTTTCGGAGTTGGGGTGTGGCAGTTTCGCCCCCGAGTTCTCTGATTTTCCGAGTTTCGACGATTTCAGCCGCGATTTCTTCATGCCGGGGCTTCCAAGTTTCGATTACGGAGAAGAAAACGTGGATGGGATGATAATTCAGGACTCCTTCTTATGGAACTTCTAA 627 0.5486 MVKPGGVEKSTEERSSTPYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPSDPPNIAGGSTMTPSQIQIAAAHFANSEPQTECSGQQLVESLASDEETASLRLESSSPPLPDVSVQNDAIFQNGSFPDPFSELGCGSFAPEFSDFPSFDDFSRDFFMPGLPSFDYGEENVDGMIIQDSFLWNF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02661 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 130 - -
Phco7g02661 208 SUPERFAMILY DNA-binding domain 19 76 IPR016177 GO:0003677
Phco7g02661 208 Pfam AP2 domain 19 67 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 CDD AP2 19 75 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Phco7g02661 208 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Phco7g02661 208 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g02661 208 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02661 Phco-Chr7 45552751 45553377 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g02661 AP2 4.2e-12 CL0081