Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02655 ATGGCTGCACGAATGGTTGTGTGTGAATCTTCTGCCATTCTTACTGCAAAACCTTCATCTACAGACACCAAGAGACAAGTTGTGGTTGGACCACCACAACCATTATTAAATCTAGATACACAGCTCTCAAAAGCATACCTTATGGTAGGTTTTGAGGTTACTGTGAAGGAAGCCAAGTCCATGGCGCTGCAATTTCTTCTCCTTCTGCTCGCTGGTGCTGCTCATGGACTCGCTTCCAATGCGACACTGAACGAGACTTGCGGATACTTCGTTGCTTCTCTCAGTAGAGATACAAATGTCCCTTGCCCAATTGGTTGGGTTATGACCCCTAACAAGACCAAGTGCTTTCTTCATGTTGGGAGGCCTCAATCTTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGCGTCATTGGCATCACTTCAGGAGCTACAATTTGCTCAGAGCCTATGTGGTGAATCTGTGAATAGTTGCTGGATTGGTGGACAAATATTCAACACTACAGCTGGTTATCAGTGGATGTGGTCTGACAATTCACCAGGGAATAACTCGATATTTCCATTGGAAGATGTTCCTCCCCATTGTAATGGAACTGAACTATCCTGTCATAAAAACAGTACAGACAATTTGTGCACGGTAATGACTAATAATTCAAACTCTCTCAAGAGTGAGAGATGCGACAATCCTCACTCTTCTCTATGTATACTCGATATAGATGCAGCATGTAACCGTATGCACTGCCATAGGGATTATTACCTTATCATCCTCATAGTGGTGAGTGCCTTGATACTCTCCACAACATTAGCAGTGGTAGTTTGGCTTCTTGTATATAAGCGGGGCAAAAAAAGAAGGCGGTCTAGAAAAATATCTATTCCAGGAGCTTCTCTTCCATCATGGAAAGTCTTCACCAAAGAGGAATTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGCGATACCAAGACTGGTGGTACATACAGTGGGGTTTTAACAGATGGTTCAAGGGTTGCAGTTAAGAGATTAAAGAGGACAAGCTTTCAGAGGAAAAAGGAGTTTTATTCTGAAATTAGCAGGGTTGCTAGGCTTCGATATCCCAATCTGGTTGCTGTGATGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGTCCCTTGGATAAATGGCTACATCACATTCCTAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCGACAACGCTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCACAAGTGGTGCATCGAGATATACGTGCAAGCAATGTACTGCTGGATGAGGAGTTTGGAGCACGGCTGATGGGTGTTGGTCTGTCCAAGATTGTGCCGTACGAAGTAATGCATGAGAGGACTGTCATGGCTGGTGGAACTTCTGGATATCTTGCTCCAGAGTTTGTGTATAGAAACGAGTTTACAACAAAGAGTGACGTATATAGTTTTGGCGTCCTACTACTTGAAATAGTAAGTGGACGTAGACCTACACAGGCAGTTGATTCTGTTGGTTGGCAGAGTATCTTTGAATGGGCAACACCTCTTGTGCAAGTTCATCGCTACCATGAACTCTTGGATCCTCACATAACTTCATCCTCTTCTAGCATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTTGTTTATTCCTGCACGCAGCATGTTCCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAACCACCTGCAAAGTAA 1818 0.4406 MAARMVVCESSAILTAKPSSTDTKRQVVVGPPQPLLNLDTQLSKAYLMVGFEVTVKEAKSMALQFLLLLLAGAAHGLASNATLNETCGYFVASLSRDTNVPCPIGWVMTPNKTKCFLHVGRPQSWNDSETCCSKYGGHLASLASLQELQFAQSLCGESVNSCWIGGQIFNTTAGYQWMWSDNSPGNNSIFPLEDVPPHCNGTELSCHKNSTDNLCTVMTNNSNSLKSERCDNPHSSLCILDIDAACNRMHCHRDYYLIILIVVSALILSTTLAVVVWLLVYKRGKKRRRSRKISIPGASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVLTDGSRVAVKRLKRTSFQRKKEFYSEISRVARLRYPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGARLMGVGLSKIVPYEVMHERTVMAGGTSGYLAPEFVYRNEFTTKSDVYSFGVLLLEIVSGRRPTQAVDSVGWQSIFEWATPLVQVHRYHELLDPHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02655 605 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
Phco7g02655 605 ProSiteProfiles Protein kinase domain profile. 319 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02655 605 Pfam Protein tyrosine and serine/threonine kinase 326 596 IPR001245 GO:0004672|GO:0006468
Phco7g02655 605 SMART tyrkin_6 328 596 IPR020635 GO:0004713|GO:0006468
Phco7g02655 605 SUPERFAMILY Protein kinase-like (PK-like) 292 597 IPR011009 -
Phco7g02655 605 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 395 605 - -
Phco7g02655 605 SMART CLECT_2 102 239 IPR001304 -
Phco7g02655 605 FunFam C-type lectin receptor-like tyrosine-protein kinase 296 394 - -
Phco7g02655 605 ProSitePatterns Tyrosine protein kinases specific active-site signature. 441 453 IPR008266 GO:0004672|GO:0006468
Phco7g02655 605 SUPERFAMILY C-type lectin-like 87 239 IPR016187 -
Phco7g02655 605 CDD CLECT 114 238 - -
Phco7g02655 605 ProSiteProfiles C-type lectin domain profile. 111 239 IPR001304 -
Phco7g02655 605 Gene3D - 89 250 IPR016186 -
Phco7g02655 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 139 600 - -
Phco7g02655 605 Gene3D Phosphorylase Kinase; domain 1 297 394 - -
Phco7g02655 605 Pfam Lectin C-type domain 122 238 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02655 Phco-Chr7 45467767 45475331 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Phco7g02655 PK_Tyr_Ser-Thr 1.6e-40 CL0016