Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02622 ATGGATGGCTCTGTCACTGTCAAGTCCGAGGTTTCCCTTCTAGAATCTTCTCCCTCTCCTGTGGAGAAACCTGATGGAGTTTGTTCCAACATGGAGGAACACCACCTGGTCCAACCCAATATGAATGACTCCTCACCCAACAAGTCAGTGCCTGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATATTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCTGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACGCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTGCCTCACAGAAGAATTCCATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGATAGGCTGGGTAGCAAAGCTCCTTATCCTTCCTCATCAACCACTAAAGTGGGTGATAACATAGAGAACAACTTCTGTGCTGACAATGCTCCAGAACTGATTTCCCTGAATCGAGCAGAGGAGGAATTCCATCCAACTGTCTCTGCCTCTTGA 624 0.4615 MDGSVTVKSEVSLLESSPSPVEKPDGVCSNMEEHHLVQPNMNDSSPNKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNIAASQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVGDNIENNFCADNAPELISLNRAEEEFHPTVSAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02622 207 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Phco7g02622 207 SMART tify_2 58 93 IPR010399 -
Phco7g02622 207 MobiDBLite consensus disorder prediction 1 16 - -
Phco7g02622 207 Pfam Jas motif 142 166 IPR018467 -
Phco7g02622 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 173 IPR040390 -
Phco7g02622 207 MobiDBLite consensus disorder prediction 1 25 - -
Phco7g02622 207 Pfam tify domain 60 92 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02622 Phco-Chr7 45145474 45148950 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco7g02622 tify 1.4e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02016 8 21519327 21521928 Phco7g02622 7 45145474 45148950 PCT