Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02606 ATGGTGATTGTAAACCTTGGGAGAAAGGAGGGGCATGGAAAACGACTTGGGAAATACGAGTTGGGAAAGACTCTTGGAGAAGGAAATTTTGGAAAGGTCAAGTTGGCAAGGGACACTGATTCTGGGAAGCTTTTTGCTGTTAAGATCCTTGAGAAGAGCAAGATTATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATCAACCTTGAAGCTTCTGAAGCACCCTAATGTCGTCAGATTATACGAGGTCTTGGCTAGCAAAGCCAAAATTTACATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGAAAAAATTGCATCCAAAGGTAAACTTGAAGAAGCTGAAGGTAGGAAGATATTCCAACAGTTGACTGATGGTGTGAGCTTCTGCCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTTCTCGATGCCAAAGGGAACATAAAGATAACCGATTTTAACCTTAGTGCTTTGCCTCAGCATTTTAGGGAAGATGGGTTGCTTCATACTACTTGTGGAAGTCCCAACTATGTTGCTCCTGAGATTCTTGCTAATAAAGGCTATGATGGTGGAACATCAGATATATGGTCATGTGGAGTTATCTTGTATGTAATTCTTACAGGATATCTTCCTTTCGATGACAGAAATCTTGCAGTTCTTTATCAGAAGATTTTTAAAGGAGACGTTCAGATACCAAGATGGCTATCACCTGGTGCTCAAAACATTATAAAAAGAATGCTTGATCCAAATCCTAAAACCCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAAGGTTATACTCCTGCAAATCCAGAAGATGAAGAAGAGGGTGTGTACATTGATGATGATGAAGCCTTTTCCATCCATAATGCGTCACTTGAATCAGATCAGGGTAGTCCGACATCACCAACACTTGTCAATGCATTTCAATTGATAGGGATGTCTTCAAGTCTAGATCTCTCTGGCCTATTTGAGAAAGAGGATGTTTCTGAGAGGAAGATAAGGTTTACATCCACCCATCCACCAAAAGATTTGGAGGAGAGGATAGAAGACATTGTAACAAGGATGAGATGTAGAGTCCAGAAGAAGAATGGGATGTTGAAAGTGATACAAGATATCAAAGCACAGAAATGTGTAGGTAGTCTTTCAGTGATCATAGAGGTATTTGAAATTAGTCCAACATTGTATGTAGTAGAGCTAAGTAAGTCTTGTGGAGATGCCTCTGCATATAGACAGTTATGCCAGAAGTTATCAAATGAATTGGGTTTTGATCCAAACCAACAGCTAGGGAGCTCAGAAATGATAGGCCTATTAAGAGAAAATAATTTGGAAGCTATATAA 1377 0.3951 MVIVNLGRKEGHGKRLGKYELGKTLGEGNFGKVKLARDTDSGKLFAVKILEKSKIIDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKAKIYMVLEYVNGGELFEKIASKGKLEEAEGRKIFQQLTDGVSFCHNKGVFHRDLKLENVLLDAKGNIKITDFNLSALPQHFREDGLLHTTCGSPNYVAPEILANKGYDGGTSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRMLDPNPKTRITMAMIKEDEWFKEGYTPANPEDEEEGVYIDDDEAFSIHNASLESDQGSPTSPTLVNAFQLIGMSSSLDLSGLFEKEDVSERKIRFTSTHPPKDLEERIEDIVTRMRCRVQKKNGMLKVIQDIKAQKCVGSLSVIIEVFEISPTLYVVELSKSCGDASAYRQLCQKLSNELGFDPNQQLGSSEMIGLLRENNLEAI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02606 458 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Phco7g02606 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Phco7g02606 458 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Phco7g02606 458 CDD CIPK_C 319 430 - -
Phco7g02606 458 FunFam Non-specific serine/threonine protein kinase 12 314 - -
Phco7g02606 458 Pfam NAF domain 315 374 IPR004041 GO:0007165
Phco7g02606 458 Gene3D Kinase associated domain 1, KA1 318 434 - -
Phco7g02606 458 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Phco7g02606 458 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Phco7g02606 458 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02606 458 FunFam Non-specific serine/threonine protein kinase 313 435 - -
Phco7g02606 458 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Phco7g02606 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 423 - -
Phco7g02606 458 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02606 458 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02606 Phco-Chr7 44954624 44959247 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco7g02606 Pkinase 7.4e-73 CL0016