Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02599 ATGCATGATTTGCGGAATCAATTTGAACAAATTGGTGTCCTCACTCATTTGTTTGGCAGCAGCAAAATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACTTTTGTTTTTGGTTTGAAAGTGTGGGTACTGATGGGAATAATAGTTGGGTTATTCATCGTAATCATTCTTGTGGTGCTATCTACATGTCTCACTTTAAGAAAGAAGTTCAGAAAAGTCAATGGCAAGCTTCCACTTAGCCATATCTTAGCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAGGTTTCAGCAAATAATCGTCCTCAGAATGGTACTTTTATGAGTCTGAATGACAAATTTGGTGAAGGGGAGACTGAAAAGGTTTTGAAACAAACACAGAATGGGGACAATAGAAGTCAATCAGGCTCGTTTAATCATTTAGAGAAAGATGCTAATGGCTCTCAATCAGGTGAAGAAAGTGGTGCTAAGGGAATATCTTCTTGTAGGTCTTCTTTGCATCCTATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCACAGCTTGGCTGGGGTCACTGGTTTACATTAAGGGACCTAGAACTTGCTACAAACAGATTTTCGAAAGAAAATGTTATTGGAGAAGGTGGATATGGAATTGTTTATCGAGGTCAATTAATCAATGGGAGTCCTGTGGCCATCAAGAAGCTTCTCAATAATTTAGGACAAGCTGAAAAGGAGTTCAGGGTGGAGGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTAGTTCGGCTTTTGGGCTACTGCATTGAAGGCACTCATAGGTTGTTGATTTATGAGTACGTAAACAACGGCAATTTAGAGCAGTGGCTTCACGGGGCCATGCGGCAGCATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCCAAAGCGCTGGCTTATTTACATGAGGCAATTGAGCCAAAAGTTGTGCATAGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCTGACTTTGGGCTGGCTAAGTTACTTGGTGCTGGAAAAAGTCATATTACAACCAGAGTAATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGCCGACCAGCAGCCGAGGTAAATTTGGTGGACTGGCTGAAGATGATGGTAGGTTTTCGACGCTCAGAAGAGGTGTTGGATCCCAACATCGAGACTAGGCCATCGACAAGTGCCCTTAAACGAGCCCTCTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCTATACCTCGAGAGGATCGAAGACGGCGGAAGAGTCAGGCAGGAAACATGGAGGTGGAGACTCATTCTGATACAGATAAGAGTGAAAATGCAGATTTTAAGTCCAATGGCAGAAGGAACCAATGTGCGTAG 1572 0.4256 MHDLRNQFEQIGVLTHLFGSSKMASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIVIILVVLSTCLTLRKKFRKVNGKLPLSHILAVSEEIKEIRVDQVSANNRPQNGTFMSLNDKFGEGETEKVLKQTQNGDNRSQSGSFNHLEKDANGSQSGEESGAKGISSCRSSLHPITAPSPLSGLPEFSQLGWGHWFTLRDLELATNRFSKENVIGEGGYGIVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGFRRSEEVLDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRKSQAGNMEVETHSDTDKSENADFKSNGRRNQCA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02599 523 CDD STKc_IRAK 210 476 - -
Phco7g02599 523 FunFam Putative receptor-like protein kinase 186 279 - -
Phco7g02599 523 Pfam Protein kinase domain 205 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02599 523 PANTHER OS01G0323000 PROTEIN 26 502 - -
Phco7g02599 523 Gene3D Phosphorylase Kinase; domain 1 184 279 - -
Phco7g02599 523 MobiDBLite consensus disorder prediction 123 165 - -
Phco7g02599 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Phco7g02599 523 SUPERFAMILY Protein kinase-like (PK-like) 188 485 IPR011009 -
Phco7g02599 523 Gene3D Transferase(Phosphotransferase) domain 1 280 492 - -
Phco7g02599 523 FunFam Putative receptor-like serine/threonine-protein kinase 280 491 - -
Phco7g02599 523 ProSiteProfiles Protein kinase domain profile. 204 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g02599 523 MobiDBLite consensus disorder prediction 477 523 - -
Phco7g02599 523 MobiDBLite consensus disorder prediction 477 514 - -
Phco7g02599 523 MobiDBLite consensus disorder prediction 128 165 - -
Phco7g02599 523 ProSitePatterns Protein kinases ATP-binding region signature. 210 233 IPR017441 GO:0005524
Phco7g02599 523 SMART serkin_6 204 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02599 Phco-Chr7 44885527 44889066 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco7g02599 Pkinase 8.3e-49 CL0016