Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02562 ATGGAAGGAGGAGTAGCAGAAGCTGATGTCTCTGCCTTCAGAGAATGTCTGTCTCTTTCATGGAGAAATCCTTATGTTCTTCGCCTTGCTCTCTCTGCTGGAATTGGAGGCTTTCTCTTTGGCTACGATACTGGAGTTATATCTGGAGCTCTTTTGTATATCAGAGATGATTTCAAAGAGGTGGATACAAAGATATGGCTGCAGGAAGCAATAGTGAGTACGACTCTTGCAGGAGCAATCATAGGAGCTTCAGTTGGTGGATGGATGAACGATCGATTTGGAAGAAAAAAGTCAATTGTTGTAGCAGATACCCTGTTTTTTATTGGGTCTATTGTGATGGCTACTGCAATGAACCCAGCAACTCTAATTGTTGGTAGAGTTTTTGTTGGCCTTGGTGTTGGAATGGCCTCAATGGCATCCCCTTTATACATCTCAGAAGCATCACCAACCAGAGTTCGAGGAGCCCTTGTTAGTCTCAATGGATTTCTCATCACTGGAGGACAGTTCCTTTCCTATGTCATCAACTTGGCCTTCACTTCTGCACCAGGAACATGGAGGTGGATGTTAGGTGTTGCTGCAGTACCAGCTTTGACACAAATCATATTGATGGCTTGTCTCCCAGAATCACCTCGCTGGTTGTTCAGAAAGGGAAAAGAAGAAGAAGCTAAAGAAATTTTGAGGAAGATTTACCCTCCCCAAGAAGTTGAAGATGAGATCAATGCTTTGAAGGAATCAGTTGAAATGGAAATCAGGGAAGCTTCAGCTTCTGACAAAGTCAGCATAATGAAACTACTGAAAACCAAGACTGTGAGAAGAGGTCTATACGCAGGAATGGGCCTTCAAATCTTCCAACAGTTTGTGGGGATTAACACTGTGATGTACTACAGCCCCACCATTGTTCAGTTAGCTGGTTTTGCATCCAATAGGGTTGCACTACTTCTTTCACTTGTCACTGCAGGGCTAAATGCATTTGGCTCTATTTTGAGCATATATTTCATTGACAAGACTGGGAGGAGGAAGCTTCTGCTGTTCAGTTTGTGTGGTGTAGTAGCTTCCCTTGTTGTTTTAACTGTTGTTTTTCATGAGACCACAACTCACTCCCCAATGGTTAGCACAATTGAAACCTCTCACTTCAACAATACCTGCCCCGGTTACACCACAGCTATGAACCCTTCTCAATGGGATTGCATGACATGCCTCAAGGCTTCTCCAGAGTGTGGCTTTTGTGCTTCTAGAGCCAACAAGCTCTTGCCTGGTGCATGCTTGATTTCGAATGAGACAACAGAAGATGAGTGCCATAAAGAGGAGAGGCTATGGTACAGTAGGGGATGTCCTAGTAAATATGGATGGCTTGCTTTAATGGGCCTAGGACTCTACATCATATTCTTCTCACCAGGGATGGGAACTGTTCCATGGGTTGTGAACTCTGAGATCTATCCCTTGAGGTACAGAGGAATCTGTGGAGGAATGGCATCTACATCTAATTGGGTTTCAAATCTGATTGTGGCCCAGTCCTTTCTATCCTTGACACAAGCCATTGGGACCTCATCCACATTCATGATATTCATATTCATCACTATTGCAGCCATTATCTTTGTCATTATTTTCGTGCCAGAAACCAAAGGACTTCCAATTGAGGAAGTGGAGAACATGCTGGAAAGAAGATCTTTGAACTTTAAGTTTTGGCACACAAGTCCTGACTCTAGTGAAGTACCAAAGGAAAGGCATCAATCAGTTTGA 1740 0.4351 MEGGVAEADVSAFRECLSLSWRNPYVLRLALSAGIGGFLFGYDTGVISGALLYIRDDFKEVDTKIWLQEAIVSTTLAGAIIGASVGGWMNDRFGRKKSIVVADTLFFIGSIVMATAMNPATLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTSAPGTWRWMLGVAAVPALTQIILMACLPESPRWLFRKGKEEEAKEILRKIYPPQEVEDEINALKESVEMEIREASASDKVSIMKLLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVTAGLNAFGSILSIYFIDKTGRRKLLLFSLCGVVASLVVLTVVFHETTTHSPMVSTIETSHFNNTCPGYTTAMNPSQWDCMTCLKASPECGFCASRANKLLPGACLISNETTEDECHKEERLWYSRGCPSKYGWLALMGLGLYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTQAIGTSSTFMIFIFITIAAIIFVIIFVPETKGLPIEEVENMLERRSLNFKFWHTSPDSSEVPKERHQSV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02562 579 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 CDD MFS_HMIT_like 32 519 - -
Phco7g02562 579 Pfam Sugar (and other) transporter 30 365 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 Pfam Sugar (and other) transporter 448 551 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 12 560 - -
Phco7g02562 579 SUPERFAMILY MFS general substrate transporter 19 549 IPR036259 -
Phco7g02562 579 FunFam Probable inositol transporter 2 20 381 - -
Phco7g02562 579 Gene3D MFS general substrate transporter like domains 436 559 IPR036259 -
Phco7g02562 579 NCBIfam sugar porter family MFS transporter 22 373 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 FunFam Probable inositol transporter 2 421 560 - -
Phco7g02562 579 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 541 IPR020846 GO:0022857
Phco7g02562 579 Gene3D MFS general substrate transporter like domains 21 395 IPR036259 -
Phco7g02562 579 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 PRINTS Sugar transporter signature 476 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 PRINTS Sugar transporter signature 453 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g02562 579 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02562 Phco-Chr7 44433158 44437655 Dispersed/Tandem